RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 FOXI2Q6ZQN5 318 aa6.78□□□□□ -1.32
CPNE4-213ENST00000515418 TRAV2A0A0B4J234 112 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 TRAV25A0A0B4J276 109 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 A0A1B0GXF2 115 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 KLLNB2CW77 178 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 H3BMM0 161 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 GNRH2O43555 120 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 AMTNQ6UX39 209 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 GNB1LQ9BYB4 327 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 A0A1B0GUT8 65 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 XKRY2A2RUG3 117 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 RBMY1BA6NDE4 496 aaKnown RBP6.77□□□□□ -1.33
CPNE4-213ENST00000515418 RBMY1EA6NEQ0 496 aaKnown RBP6.77□□□□□ -1.33
CPNE4-213ENST00000515418 CD7P09564 240 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 RBMY1DP0C7P1 496 aaKnown RBP6.77□□□□□ -1.33
CPNE4-213ENST00000515418 SLAQ13239 276 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 ANXA2RQ3ZCQ2 193 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 MSRB1Q9NZV6 116 aa6.77□□□□□ -1.33
CPNE4-213ENST00000515418 TRAV21A0A0B4J279 112 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 ZNF324O75467 553 aaPredicted RBP6.76□□□□□ -1.33
CPNE4-213ENST00000515418 DUSP14O95147 198 aaKnown RBP6.76□□□□□ -1.33
CPNE4-213ENST00000515418 S100A6P06703 90 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 HLA-DRB4P13762 266 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 HBBP68871 147 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 GFI1BQ5VTD9 330 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 WFDC10AQ9H1F0 79 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 TIMM8BQ9Y5J9 83 aaPredicted RBP6.76□□□□□ -1.33
CPNE4-213ENST00000515418 HLA-DRB4X5D2U9 266 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 MUC4Q99102 2169 aa6.76□□□□□ -1.33
CPNE4-213ENST00000515418 NBEAL2Q6ZNJ1 2754 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 TRBV7-9A0A0J9YWB2 115 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 APCSP02743 223 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 NTF3P20783 257 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 LEPP41159 167 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 CDKN1BP46527 198 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 RPS20P60866 119 aaKnown RBP6.75□□□□□ -1.33
CPNE4-213ENST00000515418 Q6AWC8 147 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 WDR73Q6P4I2 378 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 ATP5L2Q7Z4Y8 100 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 TP53TG3Q9ULZ0 132 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 C7orf71A4D174 169 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 C5orf52A6NGY3 159 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 OR11H12B2RN74 326 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 PRM2P04554 102 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 TWIST1Q15672 202 aa6.75□□□□□ -1.33
CPNE4-213ENST00000515418 H3BVH4 76 aa6.74□□□□□ -1.33
CPNE4-213ENST00000515418 CRXO43186 299 aaPredicted RBP6.74□□□□□ -1.33
CPNE4-213ENST00000515418 RBMY1A1P0DJD3 496 aaKnown RBP6.74□□□□□ -1.33
CPNE4-213ENST00000515418 RBMY1CP0DJD4 496 aa6.74□□□□□ -1.33
CPNE4-213ENST00000515418 RIGQ13278 110 aa6.74□□□□□ -1.33
CPNE4-213ENST00000515418 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
CPNE4-213ENST00000515418 RASL11AQ6T310 242 aa6.74□□□□□ -1.33
CPNE4-213ENST00000515418 OR10AG1Q8NH19 301 aa6.74□□□□□ -1.33
CPNE4-213ENST00000515418 CMYA5Q8N3K9 4069 aa6.74□□□□□ -1.33
CPNE4-213ENST00000515418 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 MT-ND6P03923 174 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 HTN1P15515 57 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 TSPOP30536 169 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 BEAN1Q3B7T3 259 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 PDZD11Q5EBL8 140 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 ODF3Q96PU9 254 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 C19orf73Q9NVV2 129 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 F2Z2F3 143 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 CTRLP40313 264 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 COX19Q49B96 90 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 FAM159AQ6UWV7 190 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 STHQ8IWL8 128 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 C3orf56Q8N813 242 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 BORCS7Q96B45 105 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 XCL2Q9UBD3 114 aa6.73□□□□□ -1.33
CPNE4-213ENST00000515418 A8MTW9 85 aa6.72□□□□□ -1.33
CPNE4-213ENST00000515418 NUPR1O60356 82 aa6.72□□□□□ -1.33
CPNE4-213ENST00000515418 IGLL1P15814 213 aa6.72□□□□□ -1.33
CPNE4-213ENST00000515418 S100A4P26447 101 aaKnown RBP6.72□□□□□ -1.33
CPNE4-213ENST00000515418 SRIP30626 198 aa6.72□□□□□ -1.33
CPNE4-213ENST00000515418 TMEM256Q8N2U0 113 aa6.72□□□□□ -1.33
CPNE4-213ENST00000515418 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.33
CPNE4-213ENST00000515418 HOXA5P20719 270 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 ASIPP42127 132 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 Q8N1Y9 231 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 DEFB125Q8N687 156 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 OR2K2Q8NGT1 345 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 ZNF747Q9BV97 191 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 MDFICQ9P1T7 246 aa6.71□□□□□ -1.33
CPNE4-213ENST00000515418 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-213ENST00000515418 IFITM10A6NMD0 228 aa6.71□□□□□ -1.34
CPNE4-213ENST00000515418 M0R381 172 aa6.71□□□□□ -1.34
CPNE4-213ENST00000515418 RPL35AP18077 110 aaKnown RBP6.71□□□□□ -1.34
CPNE4-213ENST00000515418 EVI2AP22794 236 aa6.71□□□□□ -1.34
CPNE4-213ENST00000515418 C9orf66Q5T8R8 295 aa6.71□□□□□ -1.34
CPNE4-213ENST00000515418 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
CPNE4-213ENST00000515418 TRPT1Q86TN4 253 aaKnown RBP6.71□□□□□ -1.34
CPNE4-213ENST00000515418 AMN1Q8IY45 258 aa6.71□□□□□ -1.34
CPNE4-213ENST00000515418 ALKBH7Q9BT30 221 aaPredicted RBP6.71□□□□□ -1.34
CPNE4-213ENST00000515418 IGHV1OR15-1A0A075B7D0 117 aa6.7□□□□□ -1.34
CPNE4-213ENST00000515418 A0A1B0GW15 77 aa6.7□□□□□ -1.34
CPNE4-213ENST00000515418 UBE2CO00762 179 aa6.7□□□□□ -1.34
CPNE4-213ENST00000515418 SNAI2O43623 268 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms