RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CDKN1BP46527 198 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 CAMPP49913 170 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 CRIP1P50238 77 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 ZNF80P51504 273 aaPredicted RBP6.03□□□□□ -1.44
HTT-209ENST00000512068 DEFB1P60022 68 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 KRTAP10-3P60369 221 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 ACTL10Q5JWF8 245 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 C9orf66Q5T8R8 295 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 FAM159AQ6UWV7 190 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 STHQ8IWL8 128 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 MCRIP2Q9BUT9 160 aaKnown RBP6.03□□□□□ -1.44
HTT-209ENST00000512068 GNB1LQ9BYB4 327 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 MAP6D1Q9H9H5 199 aa6.03□□□□□ -1.44
HTT-209ENST00000512068 ANK3Q12955 4377 aaKnown RBP6.02□□□□□ -1.45
HTT-209ENST00000512068 C2CD3Q4AC94 2353 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 C7orf71A4D174 169 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 GRIFINA4D1Z8 144 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 KNCNA6PVL3 124 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 APCSP02743 223 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 HLA-DRB4P13762 266 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 ASIPP42127 132 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 INSL3P51460 131 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 ODF1Q14990 250 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 RNF151Q2KHN1 245 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 C12orf54Q6X4T0 127 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 SMIM15Q7Z3B0 74 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 ZFAND2AQ8N6M9 145 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 KCNS1Q96KK3 526 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 CITED1Q99966 193 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 HLA-DRB4X5D2U9 266 aa6.02□□□□□ -1.45
HTT-209ENST00000512068 F2Z2F3 143 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 IGLV1-51P01701 117 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 AMBPP02760 352 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 TRGC1P0CF51 173 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
HTT-209ENST00000512068 NDUFA6P56556 154 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 NUTF2P61970 127 aaKnown RBP6.01□□□□□ -1.45
HTT-209ENST00000512068 SPINK13Q1W4C9 94 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 GDF5OSQ5U4N7 250 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 LYZL1Q6UWQ5 148 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 GTSCR1Q86UQ5 136 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 C3orf56Q8N813 242 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 GTSF1Q8WW33 167 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 FAM19A4Q96LR4 140 aa6.01□□□□□ -1.45
HTT-209ENST00000512068 TIMM8BQ9Y5J9 83 aaPredicted RBP6.01□□□□□ -1.45
HTT-209ENST00000512068 TRAV12-3A0A0B4J271 114 aa6□□□□□ -1.45
HTT-209ENST00000512068 KLLNB2CW77 178 aa6□□□□□ -1.45
HTT-209ENST00000512068 H3BMM0 161 aa6□□□□□ -1.45
HTT-209ENST00000512068 M0R2Z0 102 aa6□□□□□ -1.45
HTT-209ENST00000512068 ARMS2P0C7Q2 107 aa6□□□□□ -1.45
HTT-209ENST00000512068 CTRLP40313 264 aa6□□□□□ -1.45
HTT-209ENST00000512068 SSTP61278 116 aa6□□□□□ -1.45
HTT-209ENST00000512068 CACNG7P62955 275 aa6□□□□□ -1.45
HTT-209ENST00000512068 TWIST1Q15672 202 aa6□□□□□ -1.45
HTT-209ENST00000512068 GAGE13Q4V321 117 aa6□□□□□ -1.45
HTT-209ENST00000512068 MUC21Q5SSG8 566 aa6□□□□□ -1.45
HTT-209ENST00000512068 PRR9Q5T870 116 aa6□□□□□ -1.45
HTT-209ENST00000512068 SPANXN1Q5VSR9 72 aa6□□□□□ -1.45
HTT-209ENST00000512068 TMEM136Q6ZRR5 245 aa6□□□□□ -1.45
HTT-209ENST00000512068 APRG1Q8IVJ8 170 aa6□□□□□ -1.45
HTT-209ENST00000512068 TMEM158Q8WZ71 300 aa6□□□□□ -1.45
HTT-209ENST00000512068 ZNF256Q9Y2P7 627 aaPredicted RBP6□□□□□ -1.45
HTT-209ENST00000512068 SETD2Q9BYW2 2564 aaPredicted RBP6□□□□□ -1.45
HTT-209ENST00000512068 AGRNO00468 2067 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 TRGV11A0A075B6L2 103 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 TRAV12-2A0A075B6T6 113 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 A0A1B0GXF2 115 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 H3BVH4 76 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BKO60814 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 INSP01308 110 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BJP06899 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BOP23527 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 S100A2P29034 98 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BBP33778 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BDP58876 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BCP62807 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST2H2BEQ16778 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 KRTAP24-1Q3LI83 254 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 ANXA2RQ3ZCQ2 193 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.99□□□□□ -1.45
HTT-209ENST00000512068 GFI1BQ5VTD9 330 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BHQ93079 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BNQ99877 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 HIST1H2BMQ99879 126 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 PHLDA3Q9Y5J5 127 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 SORL1Q92673 2214 aa5.99□□□□□ -1.45
HTT-209ENST00000512068 IGKV3D-20A0A0C4DH25 116 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 CYSRT1A8MQ03 144 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 CD7P09564 240 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 IGLC6P0CF74 106 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 FXYD7P58549 80 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 SNRPEP62304 92 aaKnown RBP5.98□□□□□ -1.45
HTT-209ENST00000512068 ODF3L2Q3SX64 289 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 BAGE3Q86Y29 109 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 FAM110AQ9BQ89 295 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 TMEM208Q9BTX3 173 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 ZNF747Q9BV97 191 aa5.98□□□□□ -1.45
HTT-209ENST00000512068 IGHV1OR15-1A0A075B7D0 117 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms