RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TMEM92Q6UXU6 159 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 F8VRH5 84 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 GBF1Q92538 1859 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 J3QRE1 110 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 DEFB109BQ30KR1 87 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 NEXN-AS1Q8NBZ9 246 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 C14orf132Q9NPU4 83 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 NCKAP5O14513 1909 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 DYSFO75923 2080 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 IGHV1-3A0A0C4DH29 117 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 SPTY2D1-AS1A0A0U1RR47 76 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 PRO0461Q9UI25 63 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 FRMPD3Q5JV73 1810 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 TANC1Q9C0D5 1861 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 EPPINO95925 133 aa4.8□□□□□ -1.64
CLCN3-204ENST00000504131 A0A1B0GXF2 115 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 IGFL2Q6UWQ7 119 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 LYPD1Q8N2G4 141 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 Q8N8P6 123 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 ZSWIM8A7E2V4 1837 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 FRMD6-AS1P0C7T7 363 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
CLCN3-204ENST00000504131 FHL5Q5TD97 284 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 IGLV3-16A0A075B6K0 115 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 CD28P10747 220 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 FHL3Q13643 280 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 ORMDL1Q9P0S3 153 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 FHL2Q14192 279 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 EBI3Q14213 229 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 ARID2Q68CP9 1835 aa4.79□□□□□ -1.64
CLCN3-204ENST00000504131 SPTBP11277 2137 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 LINC00310P59036 64 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 Q6ZRM9 215 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 EPOPA6NHQ4 379 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 COL11A1P12107 1806 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-204ENST00000504131 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 C1orf158Q8N1D5 194 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 H0YGG7 62 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 OPRPNQ99935 248 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-204ENST00000504131 SMCPP49901 116 aaPredicted RBP4.78□□□□□ -1.64
CLCN3-204ENST00000504131 PRR4Q16378 134 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 FOXL2NBQ6ZUU3 175 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 PLXNB2O15031 1838 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 TRGV8A0A0C4DH27 118 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 TMEM14DPA8MWL7 114 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 BUB1B-PAK6H3BSN5 160 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 SUMO4Q6EEV6 95 aa4.78□□□□□ -1.64
CLCN3-204ENST00000504131 TRBV10-3A0A0K0K1G6 114 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 CDK2AP2O75956 126 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 ATP11AUNQ6ZP68 121 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 ITLN1Q8WWA0 313 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 ITLN2Q8WWU7 325 aaPredicted RBP4.77□□□□□ -1.65
CLCN3-204ENST00000504131 DOCK11Q5JSL3 2073 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 ARMS2P0C7Q2 107 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 LYZL1Q6UWQ5 148 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 H7C423 109 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 TREML4Q6UXN2 200 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 Q8NA96 180 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 GAFA1Q96PS6 74 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 DOCK8Q8NF50 2099 aa4.77□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1D-13A0A0B4J2D9 117 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1-13P0DP09 117 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 PROK2Q9HC23 129 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 Q6ZR03 302 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 F5P12259 2224 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 SDK1Q7Z5N4 2213 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 A0A0A6YYD4 124 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 IFI6P09912 130 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 FGF22Q9HCT0 170 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 MYO7AQ13402 2215 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1D-8A0A087WSZ0 117 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 SRRM4A7MD48 611 aaKnown RBP4.76□□□□□ -1.65
CLCN3-204ENST00000504131 IGHV1-2P23083 117 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 ZNF843Q8N446 348 aa4.76□□□□□ -1.65
CLCN3-204ENST00000504131 TRBV30A0A0K0K1B3 111 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 CISD3P0C7P0 127 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 WT1P19544 449 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-204ENST00000504131 CRIP2P52943 208 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-204ENST00000504131 C6orf223Q8N319 242 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 UBE2D3P61077 147 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 UBE2D2P62837 147 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 C15orf32Q32M92 178 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 PIGYQ3MUY2 71 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.75□□□□□ -1.65
CLCN3-204ENST00000504131 CKAP5Q14008 2032 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV1D-43A0A0B4J1Z2 117 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 IGHV3OR16-13A0A075B7E8 117 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 LOC101059948A0A1B0GTJ6 334 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 TM2D3Q9BRN9 247 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV2D-26A0A0A0MRZ7 120 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 H0Y9J4 135 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 OXTP01178 125 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 GPHB5Q86YW7 130 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 KLHL30-AS1Q8NEE0 82 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 SPRR3Q9UBC9 169 aa4.75□□□□□ -1.65
CLCN3-204ENST00000504131 IGKV3D-20A0A0C4DH25 116 aa4.74□□□□□ -1.65
CLCN3-204ENST00000504131 LOC100131303A0A0U1RQF7 123 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms