RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 DUSP14O95147 198 aaKnown RBP16.44■□□□□ 0.22
PTPN13-205ENST00000502971 LINC00310P59036 64 aa16.44■□□□□ 0.22
PTPN13-205ENST00000502971 DEFB114Q30KQ6 69 aa16.44■□□□□ 0.22
PTPN13-205ENST00000502971 C18orf32Q8TCD1 76 aa16.44■□□□□ 0.22
PTPN13-205ENST00000502971 NF1P21359 2839 aa16.44■□□□□ 0.22
PTPN13-205ENST00000502971 RNASE4P34096 147 aaKnown RBP16.43■□□□□ 0.22
PTPN13-205ENST00000502971 LEPP41159 167 aa16.43■□□□□ 0.22
PTPN13-205ENST00000502971 FOXI2Q6ZQN5 318 aa16.43■□□□□ 0.22
PTPN13-205ENST00000502971 TMEM61Q8N0U2 210 aa16.42■□□□□ 0.22
PTPN13-205ENST00000502971 SIGLEC8Q9NYZ4 499 aa16.42■□□□□ 0.22
PTPN13-205ENST00000502971 CD33P20138 364 aa16.42■□□□□ 0.22
PTPN13-205ENST00000502971 TWIST1Q15672 202 aa16.42■□□□□ 0.22
PTPN13-205ENST00000502971 Q6ZQT7 251 aa16.42■□□□□ 0.22
PTPN13-205ENST00000502971 NIPBLQ6KC79 2804 aaeCLIP16.41■□□□□ 0.22
PTPN13-205ENST00000502971 NTF3P20783 257 aa16.41■□□□□ 0.22
PTPN13-205ENST00000502971 TRAV25A0A0B4J276 109 aa16.4■□□□□ 0.22
PTPN13-205ENST00000502971 OR5AL1P0C617 328 aa16.4■□□□□ 0.22
PTPN13-205ENST00000502971 PRR31Q5SQ13 230 aa16.4■□□□□ 0.22
PTPN13-205ENST00000502971 SETD2Q9BYW2 2564 aaPredicted RBP16.4■□□□□ 0.22
PTPN13-205ENST00000502971 MUC21A0A0G2JKD1 596 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 MUC21A0A140T8X8 626 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 SNAI2O43623 268 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 MUC21Q5SSG8 566 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 SSTP61278 116 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 IQCJQ1A5X6 159 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 FAM104BQ5XKR9 115 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 KCNS1Q96KK3 526 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 SPAG8Q99932 426 aaPredicted RBP16.39■□□□□ 0.21
PTPN13-205ENST00000502971 NAGKQ9UJ70 344 aa16.39■□□□□ 0.21
PTPN13-205ENST00000502971 TSPOP30536 169 aa16.38■□□□□ 0.21
PTPN13-205ENST00000502971 CACNG7P62955 275 aa16.38■□□□□ 0.21
PTPN13-205ENST00000502971 KIR3DS1Q14943 382 aa16.38■□□□□ 0.21
PTPN13-205ENST00000502971 CD300EQ496F6 205 aaPredicted RBP16.38■□□□□ 0.21
PTPN13-205ENST00000502971 RCHY1Q96PM5 261 aa16.38■□□□□ 0.21
PTPN13-205ENST00000502971 TMEM191AQ9H0A3 160 aa16.38■□□□□ 0.21
PTPN13-205ENST00000502971 OR4C46A6NHA9 309 aa16.37■□□□□ 0.21
PTPN13-205ENST00000502971 ADARB2-AS1A8MUL3 147 aa16.37■□□□□ 0.21
PTPN13-205ENST00000502971 ANXA2RQ3ZCQ2 193 aa16.37■□□□□ 0.21
PTPN13-205ENST00000502971 PYY3Q5JQD4 70 aa16.37■□□□□ 0.21
PTPN13-205ENST00000502971 IGHV4-4A0A075B6R2 117 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 C7orf71A4D174 169 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 MED14OSP0DP75 135 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 DEFB131AP59861 70 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 DNLZQ5SXM8 178 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 ASIPP42127 132 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 SAMD10Q9BYL1 202 aa16.36■□□□□ 0.21
PTPN13-205ENST00000502971 CDKN1BP46527 198 aa16.35■□□□□ 0.21
PTPN13-205ENST00000502971 DMRTA1Q5VZB9 504 aa16.35■□□□□ 0.21
PTPN13-205ENST00000502971 NDUFA11Q86Y39 141 aa16.35■□□□□ 0.21
PTPN13-205ENST00000502971 AMN1Q8IY45 258 aa16.35■□□□□ 0.21
PTPN13-205ENST00000502971 MSRB1Q9NZV6 116 aa16.35■□□□□ 0.21
PTPN13-205ENST00000502971 U3KQK5 164 aa16.35■□□□□ 0.21
PTPN13-205ENST00000502971 A8MTW9 85 aa16.34■□□□□ 0.21
PTPN13-205ENST00000502971 IGKV3-20P01619 116 aa16.34■□□□□ 0.21
PTPN13-205ENST00000502971 H3BVH4 76 aa16.33■□□□□ 0.21
PTPN13-205ENST00000502971 HLA-DRB4P13762 266 aa16.33■□□□□ 0.21
PTPN13-205ENST00000502971 S100A4P26447 101 aaKnown RBP16.33■□□□□ 0.21
PTPN13-205ENST00000502971 AMTNQ6UX39 209 aa16.33■□□□□ 0.21
PTPN13-205ENST00000502971 OR10AG1Q8NH19 301 aa16.33■□□□□ 0.21
PTPN13-205ENST00000502971 ZNF256Q9Y2P7 627 aaPredicted RBP16.33■□□□□ 0.21
PTPN13-205ENST00000502971 HLA-DRB4X5D2U9 266 aa16.33■□□□□ 0.21
PTPN13-205ENST00000502971 C2CD3Q4AC94 2353 aa16.33■□□□□ 0.21
PTPN13-205ENST00000502971 ZNF324O75467 553 aaPredicted RBP16.33■□□□□ 0.2
PTPN13-205ENST00000502971 JOSD1Q15040 202 aaPredicted RBP16.33■□□□□ 0.2
PTPN13-205ENST00000502971 NSUN5P1Q3KNT7 163 aa16.33■□□□□ 0.2
PTPN13-205ENST00000502971 FAM159AQ6UWV7 190 aa16.33■□□□□ 0.2
PTPN13-205ENST00000502971 MAP6D1Q9H9H5 199 aa16.33■□□□□ 0.2
PTPN13-205ENST00000502971 JMJD1CQ15652 2540 aa16.32■□□□□ 0.2
PTPN13-205ENST00000502971 TRAV12-3A0A0B4J271 114 aa16.32■□□□□ 0.2
PTPN13-205ENST00000502971 MRPL51Q4U2R6 128 aaKnown RBP16.32■□□□□ 0.2
PTPN13-205ENST00000502971 SPANXN1Q5VSR9 72 aa16.32■□□□□ 0.2
PTPN13-205ENST00000502971 NIT1Q86X76 327 aa16.32■□□□□ 0.2
PTPN13-205ENST00000502971 KNCNA6PVL3 124 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 H3BMM0 161 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 KRTAP10-3P60369 221 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 SMIM15Q7Z3B0 74 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 ORMDL3Q8N138 153 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 CHCHD1Q96BP2 118 aaKnown RBP16.31■□□□□ 0.2
PTPN13-205ENST00000502971 SCRT2Q9NQ03 307 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 NIT2Q9NQR4 276 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 M0R2Z0 102 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 AMTP48728 403 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 TDRG1Q3Y452 100 aa16.31■□□□□ 0.2
PTPN13-205ENST00000502971 RNASEKQ6P5S7 137 aaKnown RBP16.31■□□□□ 0.2
PTPN13-205ENST00000502971 D6R8Y8 96 aa16.3■□□□□ 0.2
PTPN13-205ENST00000502971 GNRH2O43555 120 aa16.3■□□□□ 0.2
PTPN13-205ENST00000502971 HSBP1O75506 76 aa16.3■□□□□ 0.2
PTPN13-205ENST00000502971 RAB4AP20338 218 aa16.3■□□□□ 0.2
PTPN13-205ENST00000502971 SPINK13Q1W4C9 94 aa16.3■□□□□ 0.2
PTPN13-205ENST00000502971 RNF185Q96GF1 192 aa16.3■□□□□ 0.2
PTPN13-205ENST00000502971 PMCHP20382 165 aa16.29■□□□□ 0.2
PTPN13-205ENST00000502971 URB1-AS1Q96HZ7 61 aa16.29■□□□□ 0.2
PTPN13-205ENST00000502971 TRAV12-2A0A075B6T6 113 aa16.28■□□□□ 0.2
PTPN13-205ENST00000502971 PPBPP02775 128 aa16.28■□□□□ 0.2
PTPN13-205ENST00000502971 PRELID3AQ96N28 172 aa16.28■□□□□ 0.2
PTPN13-205ENST00000502971 PHLDA3Q9Y5J5 127 aa16.28■□□□□ 0.2
PTPN13-205ENST00000502971 TIMM8BQ9Y5J9 83 aaPredicted RBP16.28■□□□□ 0.2
PTPN13-205ENST00000502971 LINC00614P0C842 121 aa16.28■□□□□ 0.2
PTPN13-205ENST00000502971 RNASE3P12724 160 aaKnown RBP16.28■□□□□ 0.2
PTPN13-205ENST00000502971 CKS2P33552 79 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms