RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 TTC28Q96AY4 2481 aa9.05□□□□□ -0.96
PBX1-211ENST00000498497 F8VRH5 84 aa9.05□□□□□ -0.96
PBX1-211ENST00000498497 Q6ZS52 159 aa9.05□□□□□ -0.96
PBX1-211ENST00000498497 MSRB2Q9Y3D2 182 aa9.05□□□□□ -0.96
PBX1-211ENST00000498497 LGALS9O00182 355 aa9.05□□□□□ -0.96
PBX1-211ENST00000498497 FSTL3O95633 263 aa9.05□□□□□ -0.96
PBX1-211ENST00000498497 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.05□□□□□ -0.96
PBX1-211ENST00000498497 MRPL20Q9BYC9 149 aaKnown RBP9.05□□□□□ -0.96
PBX1-211ENST00000498497 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 IGHV1OR21-1A0A087WYE8 117 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 CXCL10P02778 98 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 PLNP26678 52 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 LAGE3Q14657 143 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 TDHQ8IZJ6 230 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 IGFBPL1Q8WX77 278 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 OTORQ9NRC9 128 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 IGHV3OR16-13A0A075B7E8 117 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 IGHV3-74A0A0B4J1X5 117 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 PRR25Q96S07 402 aa9.04□□□□□ -0.96
PBX1-211ENST00000498497 EP300Q09472 2414 aaPredicted RBP9.03□□□□□ -0.96
PBX1-211ENST00000498497 SPINK14Q6IE38 97 aa9.03□□□□□ -0.96
PBX1-211ENST00000498497 RPS19BP1Q86WX3 136 aaKnown RBP9.03□□□□□ -0.96
PBX1-211ENST00000498497 RNF185Q96GF1 192 aa9.03□□□□□ -0.96
PBX1-211ENST00000498497 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
PBX1-211ENST00000498497 SLC25A39Q9BZJ4 359 aaPredicted RBP9.03□□□□□ -0.96
PBX1-211ENST00000498497 MUC3AQ02505 3323 aa9.03□□□□□ -0.96
PBX1-211ENST00000498497 PINLYPA6NC86 204 aa9.02□□□□□ -0.96
PBX1-211ENST00000498497 NDPQ00604 133 aa9.02□□□□□ -0.96
PBX1-211ENST00000498497 RITA1Q96K30 269 aa9.02□□□□□ -0.96
PBX1-211ENST00000498497 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
PBX1-211ENST00000498497 IGLV3-32A0A0A0MS00 114 aa9.02□□□□□ -0.97
PBX1-211ENST00000498497 WISP2O76076 250 aa9.02□□□□□ -0.97
PBX1-211ENST00000498497 IGHV3-23P01764 117 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 RHOHQ15669 191 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 C17orf82Q86X59 251 aaPredicted RBP9.01□□□□□ -0.97
PBX1-211ENST00000498497 LRRC75A-AS1Q8N1F1 130 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 KLF14Q8TD94 323 aaPredicted RBP9.01□□□□□ -0.97
PBX1-211ENST00000498497 TRGV5A0A0B4J1U4 118 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 A0A0J9YY99 117 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 UQCRQO14949 82 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 MGPP08493 103 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 ATXN8Q156A1 80 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 Q6Q795 121 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 Q6ZS92 163 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 U3KQK5 164 aa9.01□□□□□ -0.97
PBX1-211ENST00000498497 RPL13AP40429 203 aaKnown RBP9□□□□□ -0.97
PBX1-211ENST00000498497 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
PBX1-211ENST00000498497 IGKV1D-17A0A075B6S4 117 aa9□□□□□ -0.97
PBX1-211ENST00000498497 A0A0U1RRA0 63 aa9□□□□□ -0.97
PBX1-211ENST00000498497 NTN3O00634 580 aaPredicted RBP9□□□□□ -0.97
PBX1-211ENST00000498497 TRIAP1O43715 76 aa9□□□□□ -0.97
PBX1-211ENST00000498497 TRACP01848 142 aa9□□□□□ -0.97
PBX1-211ENST00000498497 WT1P19544 449 aaPredicted RBP9□□□□□ -0.97
PBX1-211ENST00000498497 Q8N8P6 123 aa9□□□□□ -0.97
PBX1-211ENST00000498497 MUC22E2RYF6 1773 aaPredicted RBP9□□□□□ -0.97
PBX1-211ENST00000498497 IGHV3-66A0A0C4DH42 116 aa9□□□□□ -0.97
PBX1-211ENST00000498497 C11orf86A6NJI1 115 aa9□□□□□ -0.97
PBX1-211ENST00000498497 M0R381 172 aa9□□□□□ -0.97
PBX1-211ENST00000498497 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
PBX1-211ENST00000498497 FAM19A4Q96LR4 140 aa9□□□□□ -0.97
PBX1-211ENST00000498497 COL4A2P08572 1712 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 A0A087WVE0 104 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 IGKV3D-7A0A0C4DH55 119 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 M0R2P5 195 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 B3GALT5-AS1P59052 145 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 MUSTN1Q8IVN3 82 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 PIFOQ8TCI5 191 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 JPT2Q9H910 190 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 ZNF580Q9UK33 172 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 COL12A1Q99715 3063 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 DSCAMO60469 2012 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 EIF4EBP3O60516 100 aaPredicted RBP8.99□□□□□ -0.97
PBX1-211ENST00000498497 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 SDIM1Q6ZPB5 146 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 SMCR5Q8TEV8 140 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 ZDBF2Q9HCK1 2354 aa8.99□□□□□ -0.97
PBX1-211ENST00000498497 SPRY3O43610 288 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 LOXP28300 417 aaPredicted RBP8.98□□□□□ -0.97
PBX1-211ENST00000498497 SUB1P53999 127 aaKnown RBP eCLIP8.98□□□□□ -0.97
PBX1-211ENST00000498497 FAM27E3Q08E93 113 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 TMEM219Q86XT9 240 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 SBSPONQ8IVN8 264 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 NBASA2RRP1 2371 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 LILRA5A6NI73 299 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 OVOL1O14753 267 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 IGHV3-30P01768 117 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 GATA4P43694 442 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 FAM90A1Q86YD7 464 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 NDUFA4L2Q9NRX3 87 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 A0A1W2PPC4 97 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 SHISA9B4DS77 424 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 H7C423 109 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 FAM216BQ8N7L0 139 aa8.98□□□□□ -0.97
PBX1-211ENST00000498497 IGHV3-49A0A0A0MS15 119 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms