RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZNF137PP52743 207 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 TCL1AP56279 114 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 RANP62826 216 aaKnown RBP1.59□□□□□ -2.15
RIF1-212ENST00000498041 RPL23P62829 140 aaKnown RBP1.59□□□□□ -2.15
RIF1-212ENST00000498041 RHOGP84095 191 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 CATR1Q13166 79 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 PLGLAQ15195 96 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 IQCJQ1A5X6 159 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 Q56UQ5 140 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 ACTL10Q5JWF8 245 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 C10orf91Q5T1B1 145 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 FAM78BQ5VT40 261 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 IGFL1Q6UW32 110 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 SPNS3Q6ZMD2 512 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 ZNF767PQ75MW2 155 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 KIR2DL5AQ8N109 375 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 LYPD1Q8N2G4 141 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 OR10P1Q8NGE3 313 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 OR1L8Q8NGR8 309 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 OR2T10Q8NGZ9 312 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 OR4S2Q8NH73 311 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 LYPD6BQ8NI32 183 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 Q8TAT8 98 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 SCGB1C1Q8TD33 95 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 MBD3L1Q8WWY6 194 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 NARS2Q96I59 477 aaKnown RBP1.59□□□□□ -2.15
RIF1-212ENST00000498041 RBM14Q96PK6 669 aaKnown RBP1.59□□□□□ -2.15
RIF1-212ENST00000498041 SCGB3A2Q96PL1 93 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 TMEM147Q9BVK8 224 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 MAP1LC3BQ9GZQ8 125 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 RNASE7Q9H1E1 156 aaKnown RBP1.59□□□□□ -2.15
RIF1-212ENST00000498041 GAL3ST2Q9H3Q3 398 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 TUBA4BQ9H853 241 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 BET1LQ9NYM9 111 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 TP73-AS1Q9UF72 201 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 KPTNQ9Y664 436 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 URGCP-MRPS24S4R325 110 aa1.59□□□□□ -2.15
RIF1-212ENST00000498041 FN1P02751 2386 aaKnown RBP1.59□□□□□ -2.16
RIF1-212ENST00000498041 CEP295Q9C0D2 2601 aa1.59□□□□□ -2.16
RIF1-212ENST00000498041 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
RIF1-212ENST00000498041 ABCA13Q86UQ4 5058 aa1.59□□□□□ -2.16
RIF1-212ENST00000498041 ANK3Q12955 4377 aaKnown RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 TRAV41A0A0B4J266 112 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 KNCNA6PVL3 124 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 F6UZH7 168 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 SMKR1H3BMG3 65 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 M0R1W7 72 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 ISLRO14498 428 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 TGOLN2O43493 480 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 GNRH2O43555 120 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 HRASP01112 189 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 IFNA7P01567 189 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 APOA2P02652 100 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 TRGV3P03979 118 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 CRYBA1P05813 215 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 SEC11BP0C7V7 166 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 STAG3L2P0CL84 134 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 STAG3L3P0CL85 134 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 NUP62P37198 522 aaPredicted RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 MYCNOSP40205 109 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 RAB7AP51149 207 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 ZNF138P52744 262 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 TPPP2P59282 170 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 B2MP61769 119 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 RAB11AP62491 216 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 LOXL1Q08397 574 aaPredicted RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 ZNF345Q14585 488 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 RBMY1FQ15415 496 aaKnown RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 MSMO1Q15800 293 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 RTL8BQ17RB0 113 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 VMA21Q3ZAQ7 101 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 SMUG1Q53HV7 270 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 CLEC2AQ6UVW9 174 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 LINC00173Q6ZV60 143 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 TMEM144Q7Z5S9 345 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 SPATA12Q7Z6I5 190 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 PDPNQ86YL7 162 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 APRG1Q8IVJ8 170 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 TTC9CQ8N5M4 171 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 OR4X2Q8NGF9 303 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 OR4C13Q8NGP0 309 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 OR52E5Q8NH55 327 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 ZNF502Q8TBZ5 544 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 FRZBQ92765 325 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 MALSU1Q96EH3 234 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 GNPNAT1Q96EK6 184 aaPredicted RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 FAM210AQ96ND0 272 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 CIB3Q96Q77 187 aaPredicted RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 NDFIP1Q9BT67 221 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 COMMD5Q9GZQ3 224 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 EIF5A2Q9GZV4 153 aaKnown RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 SLC25A31Q9H0C2 315 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 MED9Q9NWA0 146 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 MRPL27Q9P0M9 148 aaKnown RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 PRELID3BQ9Y3B1 194 aa1.58□□□□□ -2.16
RIF1-212ENST00000498041 F11RQ9Y624 299 aaKnown RBP1.58□□□□□ -2.16
RIF1-212ENST00000498041 TACC2O95359 2948 aa1.57□□□□□ -2.16
RIF1-212ENST00000498041 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
RIF1-212ENST00000498041 TRAV12-2A0A075B6T6 113 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms