RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 LINC00694P0DN24 101 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 IL7P13232 177 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 PLGLB1Q02325 96 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 CTAGE3PQ8IX95 158 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 TSC22D3Q99576 134 aa0.84□□□□□ -2.27
TARDBP-210ENST00000496840 BOKQ9UMX3 212 aaPredicted RBP0.84□□□□□ -2.27
TARDBP-210ENST00000496840 LSM2Q9Y333 95 aaKnown RBP0.84□□□□□ -2.27
TARDBP-210ENST00000496840 CHD3Q12873 2000 aaKnown RBP0.84□□□□□ -2.28
TARDBP-210ENST00000496840 CCDC171Q6TFL3 1326 aa0.84□□□□□ -2.28
TARDBP-210ENST00000496840 SYNJ1O43426 1573 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 DISP2A7MBM2 1401 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 ARHGAP31Q2M1Z3 1444 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 TMEM30CPA0ZSE6 113 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 A6NN06 94 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 M0R129 80 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 IGKCP01834 107 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 TSPAN19P0C672 248 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 ADCYAP1P18509 176 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 PDE6GP18545 87 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 RHOHQ15669 191 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 SNX29P2Q8IUI4 249 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 OR10AC1Q8NH08 325 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 VPS25Q9BRG1 176 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 TPT1P8Q9HAU6 139 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 CEP152O94986 1710 aa0.83□□□□□ -2.28
TARDBP-210ENST00000496840 FER1L6Q2WGJ9 1857 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 CNTRLQ7Z7A1 2325 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 TRAV17A0A0B4J275 112 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 NDUFA2O43678 99 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 YPEL1O60688 119 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 GYPBP06028 91 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 POLR2JP52435 117 aaKnown RBP0.82□□□□□ -2.28
TARDBP-210ENST00000496840 FXYD4P59646 89 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 RPL37AP61513 92 aaKnown RBP0.82□□□□□ -2.28
TARDBP-210ENST00000496840 COPZ1P61923 177 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 RPS25P62851 125 aaKnown RBP0.82□□□□□ -2.28
TARDBP-210ENST00000496840 IQCJQ1A5X6 159 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 UNQ5815/PRO19632Q6UWF5 114 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 SLC25A26Q70HW3 274 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 SBSPONQ8IVN8 264 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 MRPL36Q9P0J6 103 aaKnown RBP0.82□□□□□ -2.28
TARDBP-210ENST00000496840 PAIP2BQ9ULR5 123 aaKnown RBP0.82□□□□□ -2.28
TARDBP-210ENST00000496840 NOP16Q9Y3C1 178 aaKnown RBP0.82□□□□□ -2.28
TARDBP-210ENST00000496840 KDM5CP41229 1560 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 SIP14410 1827 aa0.82□□□□□ -2.28
TARDBP-210ENST00000496840 PTPRFP10586 1907 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 XIRP1Q702N8 1843 aaKnown RBP0.81□□□□□ -2.28
TARDBP-210ENST00000496840 TRBV20-1A0A075B6N2 111 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 NUPR2A6NF83 97 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 NPFFO15130 113 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 TPST1O60507 370 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 IGF2P01344 180 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 IGHV3-30P01768 117 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 FREM3P0C091 2139 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 IGHV3-30-5P0DP03 117 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 LYPD5Q6UWN5 251 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 ATP6V0E2Q8NHE4 81 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 TAS2R8Q9NYW2 309 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 MYLKQ15746 1914 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 CPDO75976 1380 aa0.81□□□□□ -2.28
TARDBP-210ENST00000496840 PHRF1Q9P1Y6 1649 aaKnown RBP0.8□□□□□ -2.28
TARDBP-210ENST00000496840 A0A0G2JMM0 328 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 ZNF670-ZNF695F2Z2N8 137 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 M0R2P5 195 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 NCR2O95944 276 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 TFF1P04155 84 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 ATP11AUNQ6ZP68 121 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 SAR1AQ9NR31 198 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 ERG28Q9UKR5 140 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 USP54Q70EL1 1684 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 MED12Q93074 2177 aa0.8□□□□□ -2.28
TARDBP-210ENST00000496840 PRG4Q92954 1404 aaPredicted RBP0.8□□□□□ -2.28
TARDBP-210ENST00000496840 ZCCHC6Q5VYS8 1495 aaKnown RBP0.8□□□□□ -2.28
TARDBP-210ENST00000496840 J3QLW9 94 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 MIC13Q5XKP0 118 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 Q86TA4 180 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 ATOH7Q8N100 152 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 DYNLRB2Q8TF09 96 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 DMAC1Q96GE9 116 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 PSMG3Q9BT73 122 aaPredicted RBP0.79□□□□□ -2.28
TARDBP-210ENST00000496840 ATG5Q9H1Y0 275 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 PTPRGP23470 1445 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 CITO14578 2027 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 ERCC6Q03468 1493 aa0.79□□□□□ -2.28
TARDBP-210ENST00000496840 TRBV10-1A0A0K0K1A3 114 aa0.78□□□□□ -2.28
TARDBP-210ENST00000496840 HIGD1CA8MV81 97 aa0.78□□□□□ -2.28
TARDBP-210ENST00000496840 LINC00575Q6W349 94 aa0.78□□□□□ -2.28
TARDBP-210ENST00000496840 Q6ZQY7 126 aa0.78□□□□□ -2.28
TARDBP-210ENST00000496840 TET1Q8NFU7 2136 aa0.78□□□□□ -2.28
TARDBP-210ENST00000496840 PPDPFLQ8WWR9 84 aa0.78□□□□□ -2.28
TARDBP-210ENST00000496840 MRPL35Q9NZE8 188 aaKnown RBP0.78□□□□□ -2.28
TARDBP-210ENST00000496840 TRAV2A0A0B4J234 112 aa0.77□□□□□ -2.29
TARDBP-210ENST00000496840 TRBV30A0A0K0K1B3 111 aa0.77□□□□□ -2.29
TARDBP-210ENST00000496840 LOC101927531A0A1B0GV80 90 aa0.77□□□□□ -2.29
TARDBP-210ENST00000496840 FAM25AB3EWG3 89 aa0.77□□□□□ -2.29
TARDBP-210ENST00000496840 FAM25CB3EWG5 89 aa0.77□□□□□ -2.29
TARDBP-210ENST00000496840 FAM25GB3EWG6 89 aa0.77□□□□□ -2.29
TARDBP-210ENST00000496840 GNG7O60262 68 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 441.3 ms