RNA–Protein interactions for RNA: ENST00000496686.1

COL15A1-204, Transcript of collagen type XV alpha 1 chain, humanhuman

TSL 3

Gene COL15A1, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-204ENST00000496686 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
COL15A1-204ENST00000496686 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
COL15A1-204ENST00000496686 C7orf71A4D174 169 aa11.35□□□□□ -0.59
COL15A1-204ENST00000496686 ADARB2-AS1A8MUL3 147 aa11.35□□□□□ -0.59
COL15A1-204ENST00000496686 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
COL15A1-204ENST00000496686 LINC00310P59036 64 aa11.35□□□□□ -0.59
COL15A1-204ENST00000496686 TMEM191AQ9H0A3 160 aa11.35□□□□□ -0.59
COL15A1-204ENST00000496686 TWIST1Q15672 202 aa11.34□□□□□ -0.59
COL15A1-204ENST00000496686 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
COL15A1-204ENST00000496686 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
COL15A1-204ENST00000496686 C12orf57Q99622 126 aa11.34□□□□□ -0.59
COL15A1-204ENST00000496686 HLA-DRB4P13762 266 aa11.33□□□□□ -0.6
COL15A1-204ENST00000496686 NTF3P20783 257 aa11.33□□□□□ -0.6
COL15A1-204ENST00000496686 ASIPP42127 132 aa11.33□□□□□ -0.6
COL15A1-204ENST00000496686 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
COL15A1-204ENST00000496686 OR2K2Q8NGT1 345 aa11.33□□□□□ -0.6
COL15A1-204ENST00000496686 U3KQK5 164 aa11.33□□□□□ -0.6
COL15A1-204ENST00000496686 HLA-DRB4X5D2U9 266 aa11.33□□□□□ -0.6
COL15A1-204ENST00000496686 J3KRW8 73 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 NUPR1O60356 82 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 CD33P20138 364 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 CDKN1BP46527 198 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
COL15A1-204ENST00000496686 DEFB131AP59861 70 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 TDRG1Q3Y452 100 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 HIST2H2BDQ6DRA6 164 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 MAP6D1Q9H9H5 199 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 NAGKQ9UJ70 344 aa11.32□□□□□ -0.6
COL15A1-204ENST00000496686 OTOGQ6ZRI0 2925 aa11.31□□□□□ -0.6
COL15A1-204ENST00000496686 SMIM15Q7Z3B0 74 aa11.31□□□□□ -0.6
COL15A1-204ENST00000496686 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
COL15A1-204ENST00000496686 ZNF256Q9Y2P7 627 aaPredicted RBP11.31□□□□□ -0.6
COL15A1-204ENST00000496686 H3BMM0 161 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
COL15A1-204ENST00000496686 PPBPP02775 128 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 IQCJQ1A5X6 159 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 FAM159AQ6UWV7 190 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 Q6ZQT7 251 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 CHCHD1Q96BP2 118 aaKnown RBP11.3□□□□□ -0.6
COL15A1-204ENST00000496686 RCHY1Q96PM5 261 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
COL15A1-204ENST00000496686 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 H3BVH4 76 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 S100A4P26447 101 aaKnown RBP11.29□□□□□ -0.6
COL15A1-204ENST00000496686 KIR3DS1Q14943 382 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 JOSD1Q15040 202 aaPredicted RBP11.29□□□□□ -0.6
COL15A1-204ENST00000496686 NSUN5P1Q3KNT7 163 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
COL15A1-204ENST00000496686 PYY3Q5JQD4 70 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 AMN1Q8IY45 258 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 ORMDL3Q8N138 153 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 OR10AG1Q8NH19 301 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 LAMTOR2Q9Y2Q5 125 aa11.29□□□□□ -0.6
COL15A1-204ENST00000496686 MUC21A0A0G2JKD1 596 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 MUC21A0A140T8X8 626 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 KNCNA6PVL3 124 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 NXPH4O95158 308 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 KRTAP10-3P60369 221 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 SPANXN1Q5VSR9 72 aa11.28□□□□□ -0.6
COL15A1-204ENST00000496686 MTORP42345 2549 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 HSBP1O75506 76 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 IGLV1-51P01701 117 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 PMCHP20382 165 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 NIT1Q86X76 327 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 FAM110AQ9BQ89 295 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 MSRB1Q9NZV6 116 aa11.27□□□□□ -0.61
COL15A1-204ENST00000496686 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 D6R8Y8 96 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 M0R2Z0 102 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 SAP30O75446 220 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 RNASE3P12724 160 aaKnown RBP11.26□□□□□ -0.61
COL15A1-204ENST00000496686 RAB4AP20338 218 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 AMTP48728 403 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 RNASEKQ6P5S7 137 aaKnown RBP11.26□□□□□ -0.61
COL15A1-204ENST00000496686 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
COL15A1-204ENST00000496686 GNRH2O43555 120 aa11.25□□□□□ -0.61
COL15A1-204ENST00000496686 LINC00614P0C842 121 aa11.25□□□□□ -0.61
COL15A1-204ENST00000496686 CKS2P33552 79 aa11.25□□□□□ -0.61
COL15A1-204ENST00000496686 SSTP61278 116 aa11.25□□□□□ -0.61
COL15A1-204ENST00000496686 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
COL15A1-204ENST00000496686 URB1-AS1Q96HZ7 61 aa11.25□□□□□ -0.61
COL15A1-204ENST00000496686 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
COL15A1-204ENST00000496686 RBMY1BA6NDE4 496 aaKnown RBP11.24□□□□□ -0.61
COL15A1-204ENST00000496686 RBMY1EA6NEQ0 496 aaKnown RBP11.24□□□□□ -0.61
COL15A1-204ENST00000496686 OR11H12B2RN74 326 aa11.24□□□□□ -0.61
COL15A1-204ENST00000496686 PF4P02776 101 aa11.24□□□□□ -0.61
COL15A1-204ENST00000496686 RBMY1DP0C7P1 496 aaKnown RBP11.24□□□□□ -0.61
COL15A1-204ENST00000496686 LINC00482Q8N8I6 264 aa11.24□□□□□ -0.61
COL15A1-204ENST00000496686 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms