RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 ORM1P02763 201 aa8.32□□□□□ -1.08
MCF2L-231ENST00000494043 APOC4P55056 127 aa8.32□□□□□ -1.08
MCF2L-231ENST00000494043 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
MCF2L-231ENST00000494043 MUC21Q5SSG8 566 aa8.32□□□□□ -1.08
MCF2L-231ENST00000494043 TMSB15BA0A087X1C1 80 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 IGKV3D-20A0A0C4DH25 116 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
MCF2L-231ENST00000494043 TDRG1Q3Y452 100 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 ANXA2RQ3ZCQ2 193 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 TMEM256Q8N2U0 113 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 TMEM242Q9NWH2 141 aa8.31□□□□□ -1.08
MCF2L-231ENST00000494043 IGHV1OR15-1A0A075B7D0 117 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 A8MWL6 223 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 K7EIL1 84 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 UBE2CO00762 179 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
MCF2L-231ENST00000494043 CXCL1P09341 107 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 TSKUQ8WUA8 353 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 KCNS1Q96KK3 526 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 PYGO2Q9BRQ0 406 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 LINC00467Q9BRT7 94 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 GOLT1BQ9Y3E0 138 aa8.3□□□□□ -1.08
MCF2L-231ENST00000494043 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 GRIFINA4D1Z8 144 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 SCO1O75880 301 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 TYMSP04818 313 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 FRMD6-AS1P0C7T7 363 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 GZMBP10144 247 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 IMMP2LQ96T52 175 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 LINC01587Q99440 93 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 TMEM208Q9BTX3 173 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 GFRA4Q9GZZ7 299 aa8.29□□□□□ -1.08
MCF2L-231ENST00000494043 IGHV3OR16-12A0A075B7B8 117 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 FAM231BA6NCW3 169 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 CXorf65A6NEN9 183 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 CBY3A6NI87 242 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 ASIPP42127 132 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 TCL1AP56279 114 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 TMEM88Q6PEY1 159 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 ZNF705AQ6ZN79 300 aaPredicted RBP8.28□□□□□ -1.08
MCF2L-231ENST00000494043 CBLN2Q8IUK8 224 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 GTSF1Q8WW33 167 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 NEU1Q99519 415 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 SMCO4Q9NRQ5 59 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
MCF2L-231ENST00000494043 TRGV11A0A075B6L2 103 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 HIGD1CA8MV81 97 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 GNRH2O43555 120 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 IGLC6P0CF74 106 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 S100PP25815 95 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 DEFB135Q30KP9 77 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 DNLZQ5SXM8 178 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 KCNIP4Q6PIL6 250 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 FER1L6-AS1Q8NA97 138 aa8.27□□□□□ -1.09
MCF2L-231ENST00000494043 IGHV3-16A0A0C4DH30 117 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 MED14OSP0DP75 135 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 HTN1P15515 57 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 S100A4P26447 101 aaKnown RBP8.26□□□□□ -1.09
MCF2L-231ENST00000494043 CTRLP40313 264 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 FOXA3P55318 350 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-231ENST00000494043 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
MCF2L-231ENST00000494043 Q6ZWC4 215 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 NUP35Q8NFH5 326 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 NAT8BQ9UHF3 227 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 URGCP-MRPS24S4R325 110 aa8.26□□□□□ -1.09
MCF2L-231ENST00000494043 NBEAL2Q6ZNJ1 2754 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 H3BVH4 76 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 SNAI2O43623 268 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 PRM2P04554 102 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 ARMS2P0C7Q2 107 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 RNASE3P12724 160 aaKnown RBP8.25□□□□□ -1.09
MCF2L-231ENST00000494043 LYZL1Q6UWQ5 148 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 RNF183Q96D59 192 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 PGLYRP4Q96LB8 373 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 YPEL4Q96NS1 127 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 RCHY1Q96PM5 261 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 SSBP4Q9BWG4 385 aaPredicted RBP8.25□□□□□ -1.09
MCF2L-231ENST00000494043 MDFICQ9P1T7 246 aa8.25□□□□□ -1.09
MCF2L-231ENST00000494043 TRAV9-1A0A075B6T8 112 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 OR5AL1P0C617 328 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 AZU1P20160 251 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 ZNF415Q09FC8 603 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 ELOBQ15370 118 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 RRN3P1Q2M238 152 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 DEFB121Q5J5C9 76 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 C11orf72Q8NBR9 251 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 RNASE8Q8TDE3 154 aaKnown RBP8.24□□□□□ -1.09
MCF2L-231ENST00000494043 TMEM263Q8WUH6 116 aaKnown RBP8.24□□□□□ -1.09
MCF2L-231ENST00000494043 C9orf85Q96MD7 179 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 SCRT2Q9NQ03 307 aa8.24□□□□□ -1.09
MCF2L-231ENST00000494043 TIMM8BQ9Y5J9 83 aaPredicted RBP8.24□□□□□ -1.09
MCF2L-231ENST00000494043 X6R8D5 127 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms