RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 MINOS1Q5TGZ0 78 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 Q8N8P6 123 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 FAM110AQ9BQ89 295 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 MINOS1-NBL1R4GNA1 71 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 TRBV25-1A0A075B6N4 114 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 IGHV7-4-1A0A0J9YVY3 117 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 SAA4P35542 130 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 C8orf86Q6ZUL3 223 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 MRAP2Q96G30 205 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 AJUBAQ96IF1 538 aa10.78□□□□□ -0.68
ZIC4-215ENST00000493664 TRBV7-9A0A0J9YWB2 115 aa10.77□□□□□ -0.68
ZIC4-215ENST00000493664 LINC01546A6NGU7 62 aa10.77□□□□□ -0.68
ZIC4-215ENST00000493664 DEFB1P60022 68 aa10.77□□□□□ -0.68
ZIC4-215ENST00000493664 H3BVH4 76 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 TSPAN13O95857 204 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 SMIM13P0DJ93 91 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 PRR9Q5T870 116 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 NRACQ8N912 160 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 DPM2O94777 84 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 TMEM219Q86XT9 240 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 MAPKAPK5-AS1Q8N8E1 139 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 SLC50A1Q9BRV3 221 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 NPFFR1Q9GZQ6 430 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 KLK15Q9H2R5 256 aa10.77□□□□□ -0.69
ZIC4-215ENST00000493664 NHP2Q9NX24 153 aaKnown RBP10.77□□□□□ -0.69
ZIC4-215ENST00000493664 OOSP1A8MZH6 123 aa10.76□□□□□ -0.69
ZIC4-215ENST00000493664 IGHV3OR16-10A0A075B7F0 116 aa10.76□□□□□ -0.69
ZIC4-215ENST00000493664 CITED1Q99966 193 aa10.76□□□□□ -0.69
ZIC4-215ENST00000493664 RBAKDNA6NC62 111 aa10.75□□□□□ -0.69
ZIC4-215ENST00000493664 FABP2P12104 132 aa10.75□□□□□ -0.69
ZIC4-215ENST00000493664 METTL26Q96S19 204 aa10.75□□□□□ -0.69
ZIC4-215ENST00000493664 LAGE3Q14657 143 aa10.75□□□□□ -0.69
ZIC4-215ENST00000493664 CRYBG3Q68DQ2 2970 aa10.75□□□□□ -0.69
ZIC4-215ENST00000493664 OR11H12B2RN74 326 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 OR11H1Q8NG94 326 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 OR11H2Q8NH07 326 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 MYOZ3Q8TDC0 251 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 PIFOQ8TCI5 191 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 ATP5LO75964 103 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 ARL3P36405 182 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 EEF1AKMT3Q96AZ1 226 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 C20orf173Q96LM9 149 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 SPXQ9BT56 116 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 TNFRSF18Q9Y5U5 241 aa10.74□□□□□ -0.69
ZIC4-215ENST00000493664 SPG11Q96JI7 2443 aa10.73□□□□□ -0.69
ZIC4-215ENST00000493664 M0R381 172 aa10.73□□□□□ -0.69
ZIC4-215ENST00000493664 CACNA1AO00555 2505 aa10.73□□□□□ -0.69
ZIC4-215ENST00000493664 UBE2E1P51965 193 aa10.73□□□□□ -0.69
ZIC4-215ENST00000493664 HIGD1BQ9P298 99 aa10.73□□□□□ -0.69
ZIC4-215ENST00000493664 ABCA2Q9BZC7 2435 aa10.73□□□□□ -0.69
ZIC4-215ENST00000493664 CELSR2Q9HCU4 2923 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.69
ZIC4-215ENST00000493664 IGKV3-7A0A075B6H7 116 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 CENPVL3A0A0U1RRI6 287 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 RPL24P83731 157 aaKnown RBP10.72□□□□□ -0.69
ZIC4-215ENST00000493664 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
ZIC4-215ENST00000493664 CEND1Q8N111 149 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 DEFB104AQ8WTQ1 72 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 PHLDA1Q8WV24 401 aaPredicted RBP10.72□□□□□ -0.69
ZIC4-215ENST00000493664 UBTD1Q9HAC8 227 aa10.72□□□□□ -0.69
ZIC4-215ENST00000493664 TRBV12-3P01733 135 aa10.71□□□□□ -0.69
ZIC4-215ENST00000493664 C9orf47Q6ZRZ4 202 aa10.71□□□□□ -0.69
ZIC4-215ENST00000493664 OR5A1Q8NGJ0 315 aa10.71□□□□□ -0.69
ZIC4-215ENST00000493664 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
ZIC4-215ENST00000493664 UNQ9165/PRO28630Q6UXU0 137 aa10.71□□□□□ -0.69
ZIC4-215ENST00000493664 TSSC4Q9Y5U2 329 aaPredicted RBP10.71□□□□□ -0.69
ZIC4-215ENST00000493664 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.7
ZIC4-215ENST00000493664 A0A087WX48 190 aa10.7□□□□□ -0.7
ZIC4-215ENST00000493664 ATP5G2Q06055 141 aa10.7□□□□□ -0.7
ZIC4-215ENST00000493664 SRSF1Q07955 248 aaKnown RBP eCLIP10.7□□□□□ -0.7
ZIC4-215ENST00000493664 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
ZIC4-215ENST00000493664 RAXQ9Y2V3 346 aa10.7□□□□□ -0.7
ZIC4-215ENST00000493664 C14orf178Q8N769 122 aaPredicted RBP10.7□□□□□ -0.7
ZIC4-215ENST00000493664 TRBV7-1A0A0A6YYK4 115 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 TEX48A0A1B0GUV7 120 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 F6UB75 175 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 C5orf56Q8N8D9 126 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 TM2D2Q9BX73 214 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.69□□□□□ -0.7
ZIC4-215ENST00000493664 ID1P41134 155 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 LCNL1Q6ZST4 164 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 U3KQE9 123 aa10.69□□□□□ -0.7
ZIC4-215ENST00000493664 NPFFO15130 113 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 GATA3P23771 443 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 BRD3OSQ6XYD6 125 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 RPL11P62913 178 aaKnown RBP10.68□□□□□ -0.7
ZIC4-215ENST00000493664 HIST1H4GQ99525 98 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 IGHV3-11P01762 117 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
ZIC4-215ENST00000493664 LMO4P61968 165 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 AMTNQ6UX39 209 aa10.68□□□□□ -0.7
ZIC4-215ENST00000493664 GPHB5Q86YW7 130 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms