RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 IGKV3D-20A0A0C4DH25 116 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 G3V4G9 280 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 APOC4P55056 127 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 TDRG1Q3Y452 100 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 CBLN2Q8IUK8 224 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 PYGO2Q9BRQ0 406 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 LINC00467Q9BRT7 94 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 XCL2Q9UBD3 114 aa9.72□□□□□ -0.85
VTI1BP1-201ENST00000486325 TMSB15BA0A087X1C1 80 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 A8MZ25 164 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 F2Z2F3 143 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 UBE2CO00762 179 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 ANXA2RQ3ZCQ2 193 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 DNLZQ5SXM8 178 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 LINC01587Q99440 93 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 NEU1Q99519 415 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 C11orf21Q9P2W6 132 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 NAGKQ9UJ70 344 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 GOLT1BQ9Y3E0 138 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 URGCP-MRPS24S4R325 110 aa9.71□□□□□ -0.86
VTI1BP1-201ENST00000486325 TRRAPQ9Y4A5 3859 aa9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 HIGD1CA8MV81 97 aa9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 CA1P00915 261 aaPredicted RBP9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 FAM3BP58499 235 aaPredicted RBP9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 ELOBQ15370 118 aa9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 BORCS7Q96B45 105 aa9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 TMEM208Q9BTX3 173 aa9.7□□□□□ -0.86
VTI1BP1-201ENST00000486325 TRGV11A0A075B6L2 103 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 GRIFINA4D1Z8 144 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 IGHV4-30-4P0DP06 118 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 MED14OSP0DP75 135 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 ASIPP42127 132 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 MUC21Q5SSG8 566 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 WDR73Q6P4I2 378 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 Q6ZQT7 251 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 FER1L6-AS1Q8NA97 138 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 NUP35Q8NFH5 326 aa9.69□□□□□ -0.86
VTI1BP1-201ENST00000486325 GNRH2O43555 120 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 IGLC6P0CF74 106 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 GZMBP10144 247 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 TCL1AP56279 114 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 COX19Q49B96 90 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 KPRPQ5T749 579 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 ATP5L2Q7Z4Y8 100 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 ZNF575Q86XF7 245 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 GTSF1Q8WW33 167 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 PGLYRP4Q96LB8 373 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 YPEL4Q96NS1 127 aa9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 SSBP4Q9BWG4 385 aaPredicted RBP9.68□□□□□ -0.86
VTI1BP1-201ENST00000486325 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 A0A1B0GW15 77 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 CBY3A6NI87 242 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 COLCA2A8K830 154 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 S100A8P05109 93 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 OR5AL1P0C617 328 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 RIGQ13278 110 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 RASL11AQ6T310 242 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 LYZL1Q6UWQ5 148 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 C1orf158Q8N1D5 194 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 CSNK1G2-AS1Q8NCQ2 148 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 FAM210BQ96KR6 192 aa9.67□□□□□ -0.86
VTI1BP1-201ENST00000486325 PKD1L1Q8TDX9 2849 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 SNAI2O43623 268 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 TYMSP04818 313 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 ARMS2P0C7Q2 107 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 RBMY1A1P0DJD3 496 aaKnown RBP9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 RBMY1CP0DJD4 496 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 CACNG7P62955 275 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 RBMY1FQ15415 496 aaKnown RBP9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 TPPP3Q9BW30 176 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 TP53TG3Q9ULZ0 132 aa9.66□□□□□ -0.86
VTI1BP1-201ENST00000486325 TGIF2-C20orf24A0A0A6YYL0 155 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 IGHV3-16A0A0C4DH30 117 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 SMIM9A6NGZ8 99 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 HTN1P15515 57 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 CTRLP40313 264 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 ZNF705AQ6ZN79 300 aaPredicted RBP9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 ZNF493Q6ZR52 646 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 PHLDA3Q9Y5J5 127 aa9.65□□□□□ -0.86
VTI1BP1-201ENST00000486325 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 SPANXN1Q5VSR9 72 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 Q6ZWC4 215 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 SPXQ9BT56 116 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 CNFNQ9BYD5 112 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 MGAM2Q2M2H8 2515 aa9.64□□□□□ -0.87
VTI1BP1-201ENST00000486325 IGHV4-4A0A075B6R2 117 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 H3BVH4 76 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 SPINK4O60575 86 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 RNASE3P12724 160 aaKnown RBP9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 RAB5AP20339 215 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 NTF3P20783 257 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 HBBP68871 147 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 RRN3P1Q2M238 152 aa9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 MRPL54Q6P161 138 aaKnown RBP9.63□□□□□ -0.87
VTI1BP1-201ENST00000486325 GNB1LQ9BYB4 327 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms