RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 MYO18AQ92614 2054 aaKnown RBP3.22□□□□□ -1.89
RTN4-213ENST00000485749 MYLKQ15746 1914 aa3.22□□□□□ -1.89
RTN4-213ENST00000485749 PDCD11Q14690 1871 aaKnown RBP3.22□□□□□ -1.89
RTN4-213ENST00000485749 TRIP11Q15643 1979 aa3.21□□□□□ -1.89
RTN4-213ENST00000485749 IGLV7-46A0A075B6I9 117 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 IGHV1OR15-9A0A0B4J2B8 117 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 IGKV1-6A0A0C4DH72 117 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 A6NIN4 97 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 CPSF4LA6NMK7 179 aaKnown RBP3.21□□□□□ -1.9
RTN4-213ENST00000485749 C3orf84H3BNL1 204 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 ZNF737O75373 536 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 IGKV1-16P04430 117 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 SMIM13P0DJ93 91 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 PTHLHP12272 177 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 COL8A2P25067 703 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 WFDC2Q14508 124 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 INSL4Q14641 139 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 NMSQ5H8A3 153 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 ZC2HC1BQ5TFG8 222 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 FP248Q71RG6 208 aaPredicted RBP3.21□□□□□ -1.9
RTN4-213ENST00000485749 SPATA12Q7Z6I5 190 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 CEND1Q8N111 149 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 Q8N2B8 174 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 CYTL1Q9NRR1 136 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 DHRS4-AS1Q9P1J3 65 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 PHLDA3Q9Y5J5 127 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 MGAMO43451 1857 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 KMT2EQ8IZD2 1858 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 TRIP12Q14669 1992 aaPredicted RBP3.21□□□□□ -1.9
RTN4-213ENST00000485749 SHROOM3Q8TF72 1996 aa3.21□□□□□ -1.9
RTN4-213ENST00000485749 TNS1Q9HBL0 1735 aaKnown RBP3.21□□□□□ -1.9
RTN4-213ENST00000485749 PLXNA3P51805 1871 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-72A0A0B4J1Y9 119 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 TRAV1-1A0A0B4J248 108 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 MDFIC2A0A1B0GVS7 189 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 HMGN2P05204 90 aaKnown RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 HMGA1P17096 107 aaKnown RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 CRIP2P52943 208 aaPredicted RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 MRPL51Q4U2R6 128 aaKnown RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 SH2D6Q7Z4S9 175 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 TMEM256Q8N2U0 113 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 SERP2Q8N6R1 65 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 CHCHD1Q96BP2 118 aaKnown RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 TRGV9Q99603 122 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 NXT2Q9NPJ8 142 aaKnown RBP3.2□□□□□ -1.9
RTN4-213ENST00000485749 NCKAP5O14513 1909 aa3.2□□□□□ -1.9
RTN4-213ENST00000485749 PLXNB2O15031 1838 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 MIA3Q5JRA6 1907 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 IGLV1-50A0A075B6I6 118 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 IGHV1-24A0A0C4DH33 117 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 CRYM-AS1A6NIL9 109 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 SOCS3O14543 225 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 NDUFC1O43677 76 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 LY6G6DO95868 133 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 CCL4P13236 92 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 PEBP1P30086 187 aaKnown RBP3.19□□□□□ -1.9
RTN4-213ENST00000485749 TSPEAR-AS2P59090 65 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 KRTAP27-1Q3LI81 207 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 ASB16-AS1Q495Z4 193 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 SLC48A1Q6P1K1 146 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 Q6ZTC4 211 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 C18orf65Q6ZTR6 163 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 Q8N8P6 123 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 NPBQ8NG41 125 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 CLDND2Q8NHS1 167 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 OR8B2Q96RD0 313 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 LITAFQ99732 161 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 SDF2L1Q9HCN8 221 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 PAPPA2Q9BXP8 1791 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 GBF1Q92538 1859 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 MICAL3Q7RTP6 2002 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 NOTCH4Q99466 2003 aa3.19□□□□□ -1.9
RTN4-213ENST00000485749 OTOFQ9HC10 1997 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-49A0A0A0MS15 119 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-43A0A0B4J1X8 118 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 SRRM5B3KS81 715 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 NUPR1O60356 82 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 ACYP1P07311 99 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 IFI6P09912 130 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 SLC25A16P16260 332 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 MPV17P39210 176 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 LYPD2Q6UXB3 125 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 PATE2Q6UY27 113 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 Q8NBF4 154 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 AQP3Q92482 292 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 B9D2Q9BPU9 175 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 WFDC6Q9BQY6 131 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 TTTY13Q9BZ97 58 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 CST11Q9H112 138 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 TMEM14AQ9Y6G1 99 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 MCM3APO60318 1980 aa3.18□□□□□ -1.9
RTN4-213ENST00000485749 TRAV14DV4A0A0A6YYC5 116 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 IGHV3-21A0A0B4J1V1 117 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 TRAV17A0A0B4J275 112 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 IGHV7-4-1A0A0J9YVY3 117 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 IGHV1-69P01742 117 aa3.17□□□□□ -1.9
RTN4-213ENST00000485749 RBM3P98179 157 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms