RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 HIST1H2BAQ96A08 127 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 SDF2L1Q9HCN8 221 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 MDFICQ9P1T7 246 aa13.45□□□□□ -0.26
SNX17-206ENST00000484886 A0A0J9YY99 117 aa13.44□□□□□ -0.26
SNX17-206ENST00000484886 PAGE4O60829 102 aa13.44□□□□□ -0.26
SNX17-206ENST00000484886 KCNS1Q96KK3 526 aa13.44□□□□□ -0.26
SNX17-206ENST00000484886 ARL2-SNX15V9GYD0 113 aa13.44□□□□□ -0.26
SNX17-206ENST00000484886 TRAV26-1A0A087WT03 109 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 GNRH2O43555 120 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 HOXA5P20719 270 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 UBE2G1P62253 170 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 LGALS9BQ3B8N2 356 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 Q86TA4 180 aa13.43□□□□□ -0.26
SNX17-206ENST00000484886 IGHV3-53P01767 116 aa13.42□□□□□ -0.26
SNX17-206ENST00000484886 PFN1P07737 140 aaKnown RBP13.42□□□□□ -0.26
SNX17-206ENST00000484886 ZNF80P51504 273 aaPredicted RBP13.42□□□□□ -0.26
SNX17-206ENST00000484886 SLC51BQ86UW2 128 aa13.42□□□□□ -0.26
SNX17-206ENST00000484886 TCEAL7Q9BRU2 100 aa13.42□□□□□ -0.26
SNX17-206ENST00000484886 SPXQ9BT56 116 aa13.42□□□□□ -0.26
SNX17-206ENST00000484886 TYMSP04818 313 aa13.41□□□□□ -0.26
SNX17-206ENST00000484886 AKR1C3P42330 323 aa13.41□□□□□ -0.26
SNX17-206ENST00000484886 RAB5CP51148 216 aa13.41□□□□□ -0.26
SNX17-206ENST00000484886 FMC1Q96HJ9 113 aa13.41□□□□□ -0.26
SNX17-206ENST00000484886 IGHV3-16A0A0C4DH30 117 aa13.4□□□□□ -0.26
SNX17-206ENST00000484886 C18orf15Q96N68 181 aa13.4□□□□□ -0.26
SNX17-206ENST00000484886 TEX46H3BTG2 121 aa13.39□□□□□ -0.27
SNX17-206ENST00000484886 RNF212Q495C1 297 aa13.39□□□□□ -0.27
SNX17-206ENST00000484886 A0A1B0GVG6 124 aa13.38□□□□□ -0.27
SNX17-206ENST00000484886 SULT1A2P50226 295 aa13.38□□□□□ -0.27
SNX17-206ENST00000484886 C9orf62Q8N4C0 152 aa13.38□□□□□ -0.27
SNX17-206ENST00000484886 GNG13Q9P2W3 67 aa13.38□□□□□ -0.27
SNX17-206ENST00000484886 C11orf21Q9P2W6 132 aa13.38□□□□□ -0.27
SNX17-206ENST00000484886 VPS13DQ5THJ4 4388 aa13.38□□□□□ -0.27
SNX17-206ENST00000484886 M0R2P5 195 aa13.37□□□□□ -0.27
SNX17-206ENST00000484886 CCL18P55774 89 aa13.37□□□□□ -0.27
SNX17-206ENST00000484886 MANBALQ9NQG1 85 aa13.37□□□□□ -0.27
SNX17-206ENST00000484886 ZFP30Q9Y2G7 519 aa13.37□□□□□ -0.27
SNX17-206ENST00000484886 TRGV4A0A0C4DH28 118 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 SCO2A0A1W2PP80 73 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 FABP5P3A8MUU1 101 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 M0R2N4 97 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 RASL10AQ92737 203 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 ZC2HC1AQ96GY0 325 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 KMT2AQ03164 3969 aa13.36□□□□□ -0.27
SNX17-206ENST00000484886 MUC4Q99102 2169 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 IGLV2-18A0A075B6J9 118 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 C9JCJ5 164 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 PAX4O43316 350 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 ORM1P02763 201 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 SFTA3P0C7M3 94 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 CCL20P78556 96 aa13.35□□□□□ -0.27
SNX17-206ENST00000484886 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
SNX17-206ENST00000484886 H3BNG1 76 aa13.34□□□□□ -0.27
SNX17-206ENST00000484886 LTAP01374 205 aa13.34□□□□□ -0.27
SNX17-206ENST00000484886 S100A9P06702 114 aaKnown RBP13.34□□□□□ -0.27
SNX17-206ENST00000484886 S100A4P26447 101 aaKnown RBP13.34□□□□□ -0.27
SNX17-206ENST00000484886 FAM162BQ5T6X4 162 aa13.34□□□□□ -0.27
SNX17-206ENST00000484886 NHLRC2Q8NBF2 726 aa13.34□□□□□ -0.27
SNX17-206ENST00000484886 OR4C5Q8NGB2 326 aa13.34□□□□□ -0.27
SNX17-206ENST00000484886 TRBV6-1A0A0K0K1D8 114 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 B4DEV8 164 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 SH2D1AO60880 128 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 SLAQ13239 276 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 VSIG2Q96IQ7 327 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 ZNF479Q96JC4 524 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 PRO0255Q9UI72 69 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 HHLA3Q9XRX5 114 aa13.33□□□□□ -0.28
SNX17-206ENST00000484886 TRAV4A0A0B4J268 109 aa13.32□□□□□ -0.28
SNX17-206ENST00000484886 M0R036 132 aa13.32□□□□□ -0.28
SNX17-206ENST00000484886 IFNA1P01562 189 aa13.32□□□□□ -0.28
SNX17-206ENST00000484886 ASIPP42127 132 aa13.32□□□□□ -0.28
SNX17-206ENST00000484886 NKX2-5P52952 324 aaPredicted RBP13.32□□□□□ -0.28
SNX17-206ENST00000484886 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
SNX17-206ENST00000484886 FHL2Q14192 279 aa13.32□□□□□ -0.28
SNX17-206ENST00000484886 ZNF876PQ49A33 203 aa13.32□□□□□ -0.28
SNX17-206ENST00000484886 DNAH6Q9C0G6 4158 aa13.31□□□□□ -0.28
SNX17-206ENST00000484886 IGKV3D-20A0A0C4DH25 116 aa13.31□□□□□ -0.28
SNX17-206ENST00000484886 LINC00588Q9Y4M8 146 aa13.31□□□□□ -0.28
SNX17-206ENST00000484886 ICOSQ9Y6W8 199 aa13.31□□□□□ -0.28
SNX17-206ENST00000484886 NACAE9PAV3 2078 aa13.31□□□□□ -0.28
SNX17-206ENST00000484886 CRYBA4P53673 196 aa13.3□□□□□ -0.28
SNX17-206ENST00000484886 ALKAL2Q6UX46 152 aa13.3□□□□□ -0.28
SNX17-206ENST00000484886 PCNPQ8WW12 178 aaKnown RBP13.3□□□□□ -0.28
SNX17-206ENST00000484886 C9orf85Q96MD7 179 aa13.3□□□□□ -0.28
SNX17-206ENST00000484886 TMSB15BA0A087X1C1 80 aa13.29□□□□□ -0.28
SNX17-206ENST00000484886 A0A096LPF7 62 aa13.29□□□□□ -0.28
SNX17-206ENST00000484886 RNASE3P12724 160 aaKnown RBP13.29□□□□□ -0.28
SNX17-206ENST00000484886 CRIP1P50238 77 aa13.29□□□□□ -0.28
SNX17-206ENST00000484886 COX8CQ7Z4L0 72 aa13.29□□□□□ -0.28
SNX17-206ENST00000484886 BAGE2Q86Y30 109 aa13.29□□□□□ -0.28
SNX17-206ENST00000484886 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
SNX17-206ENST00000484886 RPL35P42766 123 aaKnown RBP13.28□□□□□ -0.28
SNX17-206ENST00000484886 ZNF674Q2M3X9 581 aa13.28□□□□□ -0.28
SNX17-206ENST00000484886 ZNF506Q5JVG8 444 aa13.28□□□□□ -0.28
SNX17-206ENST00000484886 TXNDC17Q9BRA2 123 aa13.28□□□□□ -0.28
SNX17-206ENST00000484886 GRIFINA4D1Z8 144 aa13.27□□□□□ -0.29
SNX17-206ENST00000484886 PGPEP1LA6NFU8 196 aa13.27□□□□□ -0.29
SNX17-206ENST00000484886 H3BVH4 76 aa13.27□□□□□ -0.29
SNX17-206ENST00000484886 MEF2BQ02080 365 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms