RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 YPEL1O60688 119 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 CISD3P0C7P0 127 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 CRYGAP11844 174 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 FXYD2P54710 66 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 LINC00467Q9BRT7 94 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 RPL26L1Q9UNX3 145 aaKnown RBP5.14□□□□□ -1.59
LSM5-210ENST00000480956 FAM215AQ9Y5M1 114 aa5.14□□□□□ -1.59
LSM5-210ENST00000480956 TRGV5A0A0B4J1U4 118 aa5.13□□□□□ -1.59
LSM5-210ENST00000480956 LOC107986453A0A1B0GWG9 222 aa5.13□□□□□ -1.59
LSM5-210ENST00000480956 PANO1I0J062 215 aa5.13□□□□□ -1.59
LSM5-210ENST00000480956 OR5AS1Q8N127 324 aa5.13□□□□□ -1.59
LSM5-210ENST00000480956 KLF14Q8TD94 323 aaPredicted RBP5.13□□□□□ -1.59
LSM5-210ENST00000480956 ZNF318Q5VUA4 2279 aa5.13□□□□□ -1.59
LSM5-210ENST00000480956 TRBV10-2A0A0K0K1G8 114 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 SAA1P0DJI8 122 aaPredicted RBP5.12□□□□□ -1.59
LSM5-210ENST00000480956 CCL4P13236 92 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 COL8A2P25067 703 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 GNG11P61952 73 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 CIRBPQ14011 172 aaKnown RBP5.12□□□□□ -1.59
LSM5-210ENST00000480956 SS18Q15532 418 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 PABPC1L2AQ5JQF8 200 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 LYZL1Q6UWQ5 148 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 RAB37Q96AX2 223 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 RETNLBQ9BQ08 111 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 TAS2R4Q9NYW5 299 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 TPRKBQ9Y3C4 175 aa5.12□□□□□ -1.59
LSM5-210ENST00000480956 H7C2G1 150 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 APOC4-APOC2K7ER74 178 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 LYRM1O43325 122 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 ZNF737O75373 536 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 WISP3O95389 354 aaPredicted RBP5.11□□□□□ -1.59
LSM5-210ENST00000480956 IGKV3-20P01619 116 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 APOC2P02655 101 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 DEFA4P12838 97 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 Q6P435 159 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 Q8N2B8 174 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 CLEC2BQ92478 149 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 KIAA0100Q14667 2235 aaKnown RBP5.11□□□□□ -1.59
LSM5-210ENST00000480956 DOCK9Q9BZ29 2069 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 PITX3O75364 302 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 C9orf153Q5TBE3 101 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 FOXI2Q6ZQN5 318 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 MAPK1IP1LQ8NDC0 245 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 CCL4L1Q8NHW4 92 aa5.11□□□□□ -1.59
LSM5-210ENST00000480956 ANK1P16157 1881 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 C11orf86A6NJI1 115 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 KRTAP29-1A8MX34 341 aaPredicted RBP5.1□□□□□ -1.59
LSM5-210ENST00000480956 C16orf90A8MZG2 172 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 ZNF22P17026 224 aaPredicted RBP5.1□□□□□ -1.59
LSM5-210ENST00000480956 PEBP1P30086 187 aaKnown RBP5.1□□□□□ -1.59
LSM5-210ENST00000480956 IGFL3Q6UXB1 125 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 ZNF720Q7Z2F6 126 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 CDH23Q9H251 3354 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 LAMA3Q16787 3333 aa5.1□□□□□ -1.59
LSM5-210ENST00000480956 ZNF79Q15937 498 aa5.09□□□□□ -1.59
LSM5-210ENST00000480956 FAM27BQ5VT28 67 aa5.09□□□□□ -1.59
LSM5-210ENST00000480956 LINC00471Q8N535 108 aa5.09□□□□□ -1.59
LSM5-210ENST00000480956 NOP16Q9Y3C1 178 aaKnown RBP5.09□□□□□ -1.59
LSM5-210ENST00000480956 SERP1Q9Y6X1 66 aa5.09□□□□□ -1.59
LSM5-210ENST00000480956 ZFC3H1O60293 1989 aaKnown RBP5.09□□□□□ -1.6
LSM5-210ENST00000480956 NYNRINQ9P2P1 1898 aaKnown RBP5.09□□□□□ -1.6
LSM5-210ENST00000480956 M0R2P5 195 aa5.09□□□□□ -1.6
LSM5-210ENST00000480956 HYPMO75409 117 aa5.09□□□□□ -1.6
LSM5-210ENST00000480956 CKS2P33552 79 aa5.09□□□□□ -1.6
LSM5-210ENST00000480956 Q6ZS52 159 aa5.09□□□□□ -1.6
LSM5-210ENST00000480956 CXCL16Q9H2A7 254 aa5.09□□□□□ -1.6
LSM5-210ENST00000480956 MYO10Q9HD67 2058 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 HEATR5AQ86XA9 2040 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 TANC2Q9HCD6 1990 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 PTPRSQ13332 1948 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 ALPK3Q96L96 1907 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 TANC1Q9C0D5 1861 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 COL1A2P08123 1366 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 ZNF736B4DX44 427 aaPredicted RBP5.08□□□□□ -1.6
LSM5-210ENST00000480956 GNRH2O43555 120 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 CPSF4O95639 269 aaKnown RBP5.08□□□□□ -1.6
LSM5-210ENST00000480956 TRACP01848 142 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 ESRGQ1W209 222 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 Q8NAQ8 132 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 POP5Q969H6 163 aaKnown RBP5.08□□□□□ -1.6
LSM5-210ENST00000480956 LINC00526Q96FQ7 95 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 NABP2Q9BQ15 211 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 Q9Y3F1 56 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 LY96Q9Y6Y9 160 aa5.08□□□□□ -1.6
LSM5-210ENST00000480956 KIF26AQ9ULI4 1882 aaPredicted RBP5.08□□□□□ -1.6
LSM5-210ENST00000480956 TET1Q8NFU7 2136 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 RANBP2P49792 3224 aaKnown RBP5.07□□□□□ -1.6
LSM5-210ENST00000480956 MCRIP1C9JLW8 97 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 CXCL8P10145 99 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 CD52P31358 61 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 MIC13Q5XKP0 118 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 LINC00612Q8N6U2 182 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 OR4X2Q8NGF9 303 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 OR5AK2Q8NH90 309 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 GFRA4Q9GZZ7 299 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 MINOS1-NBL1R4GNA1 71 aa5.07□□□□□ -1.6
LSM5-210ENST00000480956 C3orf85A0A1B0GTC6 90 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 C7orf66A4D0T2 115 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 SHBGP04278 402 aa5.06□□□□□ -1.6
LSM5-210ENST00000480956 OTOSQ8NHW6 89 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms