RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 C1QTNF4Q9BXJ3 329 aa12.84□□□□□ -0.35
UPF3A-206ENST00000480362 XKRY2A2RUG3 117 aa12.83□□□□□ -0.36
UPF3A-206ENST00000480362 GRIFINA4D1Z8 144 aa12.83□□□□□ -0.36
UPF3A-206ENST00000480362 TCL1AP56279 114 aa12.83□□□□□ -0.36
UPF3A-206ENST00000480362 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-206ENST00000480362 KPRPQ5T749 579 aaPredicted RBP12.83□□□□□ -0.36
UPF3A-206ENST00000480362 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
UPF3A-206ENST00000480362 IMMP2LQ96T52 175 aa12.83□□□□□ -0.36
UPF3A-206ENST00000480362 C20orf144Q9BQM9 153 aa12.83□□□□□ -0.36
UPF3A-206ENST00000480362 IGHV1OR15-1A0A075B7D0 117 aa12.82□□□□□ -0.36
UPF3A-206ENST00000480362 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
UPF3A-206ENST00000480362 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
UPF3A-206ENST00000480362 LINC01587Q99440 93 aa12.82□□□□□ -0.36
UPF3A-206ENST00000480362 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
UPF3A-206ENST00000480362 KIR2DL5BA0A0G2JN68 375 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 KIR2DL5BA0A0G2JPC4 375 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 GNRH2O43555 120 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 S100PP25815 95 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 APOC4P55056 127 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 KCNIP4Q6PIL6 250 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 KIR2DL5AQ8N109 375 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 CSNK1G2-AS1Q8NCQ2 148 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 KIR2DL5BQ8NHK3 375 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 GTSF1Q8WW33 167 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 KCNS1Q96KK3 526 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 NEU1Q99519 415 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
UPF3A-206ENST00000480362 FAM231BA6NCW3 169 aa12.8□□□□□ -0.36
UPF3A-206ENST00000480362 A8MZ25 164 aa12.8□□□□□ -0.36
UPF3A-206ENST00000480362 PRB2P02812 416 aaPredicted RBP12.8□□□□□ -0.36
UPF3A-206ENST00000480362 TDRG1Q3Y452 100 aa12.8□□□□□ -0.36
UPF3A-206ENST00000480362 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
UPF3A-206ENST00000480362 TMEM208Q9BTX3 173 aa12.8□□□□□ -0.36
UPF3A-206ENST00000480362 TP53TG3Q9ULZ0 132 aa12.8□□□□□ -0.36
UPF3A-206ENST00000480362 IGHV3OR16-12A0A075B7B8 117 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 HIGD1CA8MV81 97 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 TYMSP04818 313 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 HTN1P15515 57 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 FOXA3P55318 350 aaPredicted RBP12.79□□□□□ -0.36
UPF3A-206ENST00000480362 TMEM256Q8N2U0 113 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 PGLYRP4Q96LB8 373 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 NAT8BQ9UHF3 227 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
UPF3A-206ENST00000480362 CBY3A6NI87 242 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 PRM2P04554 102 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 CXCL1P09341 107 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 ELOBQ15370 118 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 YPEL4Q96NS1 127 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
UPF3A-206ENST00000480362 A0A1W2PPQ1 181 aa12.77□□□□□ -0.37
UPF3A-206ENST00000480362 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
UPF3A-206ENST00000480362 ASIPP42127 132 aa12.77□□□□□ -0.37
UPF3A-206ENST00000480362 DNLZQ5SXM8 178 aa12.77□□□□□ -0.37
UPF3A-206ENST00000480362 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.37
UPF3A-206ENST00000480362 TPPP3Q9BW30 176 aa12.77□□□□□ -0.37
UPF3A-206ENST00000480362 TGIF2-C20orf24A0A0A6YYL0 155 aa12.76□□□□□ -0.37
UPF3A-206ENST00000480362 UBE2CO00762 179 aa12.76□□□□□ -0.37
UPF3A-206ENST00000480362 SPINK4O60575 86 aa12.76□□□□□ -0.37
UPF3A-206ENST00000480362 ARMS2P0C7Q2 107 aa12.76□□□□□ -0.37
UPF3A-206ENST00000480362 LYZL1Q6UWQ5 148 aa12.76□□□□□ -0.37
UPF3A-206ENST00000480362 BTF3L4Q96K17 158 aa12.76□□□□□ -0.37
UPF3A-206ENST00000480362 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
UPF3A-206ENST00000480362 TRGV11A0A075B6L2 103 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 TRAV9-1A0A075B6T8 112 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 IGHV3-16A0A0C4DH30 117 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 H3BVH4 76 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 K7EIL1 84 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 FRMD6-AS1P0C7T7 363 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 RNASE3P12724 160 aaKnown RBP12.75□□□□□ -0.37
UPF3A-206ENST00000480362 ZNF705AQ6ZN79 300 aaPredicted RBP12.75□□□□□ -0.37
UPF3A-206ENST00000480362 MDFICQ9P1T7 246 aa12.75□□□□□ -0.37
UPF3A-206ENST00000480362 PKD1L1Q8TDX9 2849 aa12.74□□□□□ -0.37
UPF3A-206ENST00000480362 MUC21A0A0G2JKD1 596 aa12.74□□□□□ -0.37
UPF3A-206ENST00000480362 MUC21A0A140T8X8 626 aa12.74□□□□□ -0.37
UPF3A-206ENST00000480362 COLCA2A8K830 154 aa12.74□□□□□ -0.37
UPF3A-206ENST00000480362 AZU1P20160 251 aa12.74□□□□□ -0.37
UPF3A-206ENST00000480362 SSBP4Q9BWG4 385 aaPredicted RBP12.74□□□□□ -0.37
UPF3A-206ENST00000480362 TRBV24-1A0A075B6N3 115 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 F2Z2F3 143 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 SPRY2O43597 315 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 SNAI2O43623 268 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 OR5AL1P0C617 328 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 CTRLP40313 264 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 SSTP61278 116 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
UPF3A-206ENST00000480362 MRPL54Q6P161 138 aaKnown RBP12.73□□□□□ -0.37
UPF3A-206ENST00000480362 A0A1B0GUT8 65 aa12.72□□□□□ -0.37
UPF3A-206ENST00000480362 MED14OSP0DP75 135 aa12.72□□□□□ -0.37
UPF3A-206ENST00000480362 DEFB121Q5J5C9 76 aa12.72□□□□□ -0.37
UPF3A-206ENST00000480362 BORCS7Q96B45 105 aa12.72□□□□□ -0.37
UPF3A-206ENST00000480362 FAM210BQ96KR6 192 aa12.72□□□□□ -0.37
UPF3A-206ENST00000480362 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
UPF3A-206ENST00000480362 Q6ZWC4 215 aa12.71□□□□□ -0.37
UPF3A-206ENST00000480362 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
UPF3A-206ENST00000480362 OR10AG1Q8NH19 301 aa12.71□□□□□ -0.37
UPF3A-206ENST00000480362 RCHY1Q96PM5 261 aa12.71□□□□□ -0.37
UPF3A-206ENST00000480362 SCRT2Q9NQ03 307 aa12.71□□□□□ -0.37
UPF3A-206ENST00000480362 GSN-AS1Q9NRJ2 163 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms