RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 Q8N6K4 173 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 NRACQ8N912 160 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 AJUBAQ96IF1 538 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 SPG11Q96JI7 2443 aa10.22□□□□□ -0.77
PDZRN3-208ENST00000479530 ATP5LO75964 103 aa10.21□□□□□ -0.77
PDZRN3-208ENST00000479530 CD300EQ496F6 205 aaPredicted RBP10.21□□□□□ -0.77
PDZRN3-208ENST00000479530 UFC1Q9Y3C8 167 aa10.21□□□□□ -0.77
PDZRN3-208ENST00000479530 SPRY2O43597 315 aa10.21□□□□□ -0.78
PDZRN3-208ENST00000479530 TTC9CQ8N5M4 171 aa10.21□□□□□ -0.78
PDZRN3-208ENST00000479530 CRYBG3Q68DQ2 2970 aa10.21□□□□□ -0.78
PDZRN3-208ENST00000479530 F8W1H4 67 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 Q8N9W7 124 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 IGHV3-49A0A0A0MS15 119 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 CCDC144NLQ6NUI1 221 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 KLK15Q9H2R5 256 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 SRSF2Q01130 221 aaKnown RBP10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 ATP5G2Q06055 141 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 LAGE3Q14657 143 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 MYOZ3Q8TDC0 251 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 AGPAT4-IT1Q9H0P7 198 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 UBTD1Q9HAC8 227 aa10.2□□□□□ -0.78
PDZRN3-208ENST00000479530 A0A087WX48 190 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 G3V318 75 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 ECSCRQ19T08 205 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 PRO0461Q9UI25 63 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 IGHV3OR16-10A0A075B7F0 116 aa10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 SRSF1Q07955 248 aaKnown RBP eCLIP10.19□□□□□ -0.78
PDZRN3-208ENST00000479530 TRBV7-3A0A075B6L6 115 aa10.18□□□□□ -0.78
PDZRN3-208ENST00000479530 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.18□□□□□ -0.78
PDZRN3-208ENST00000479530 CFAP46Q8IYW2 2715 aa10.18□□□□□ -0.78
PDZRN3-208ENST00000479530 UTP20O75691 2785 aaKnown RBP10.18□□□□□ -0.78
PDZRN3-208ENST00000479530 C19orf84I3L1E1 186 aa10.18□□□□□ -0.78
PDZRN3-208ENST00000479530 PSMG4Q5JS54 123 aa10.18□□□□□ -0.78
PDZRN3-208ENST00000479530 BUB3O43684 328 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 CYSLTR1Q9Y271 337 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 ATP6V0E1O15342 81 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 CLEC3BP05452 202 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 HLA-DRB4P13762 266 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 EBI3Q14213 229 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 C15orf32Q32M92 178 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 GAGE13Q4V321 117 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 SFTA2Q6UW10 78 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 SPATA25Q9BR10 227 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 BPESC1Q9GZL8 116 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 LINC00527Q9UJ94 153 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 HLA-DRB4X5D2U9 266 aa10.17□□□□□ -0.78
PDZRN3-208ENST00000479530 SAA4P35542 130 aa10.16□□□□□ -0.78
PDZRN3-208ENST00000479530 TCTEX1D4Q5JR98 221 aa10.16□□□□□ -0.78
PDZRN3-208ENST00000479530 MORN3Q6PF18 240 aaPredicted RBP10.16□□□□□ -0.78
PDZRN3-208ENST00000479530 ZFAND3Q9H8U3 227 aa10.16□□□□□ -0.78
PDZRN3-208ENST00000479530 TRAV8-2A0A0B4J237 113 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 CLPSL1A2RUU4 121 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 C1orf122Q6ZSJ8 110 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 TMEM219Q86XT9 240 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 GEMIN7Q9H840 131 aaKnown RBP10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 H3BVH4 76 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 J3KRW8 73 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 IGF1P05019 195 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 PRR9Q5T870 116 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 SPANXN1Q5VSR9 72 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 PGPEP1Q9NXJ5 209 aa10.15□□□□□ -0.78
PDZRN3-208ENST00000479530 FLNCQ14315 2725 aa10.15□□□□□ -0.79
PDZRN3-208ENST00000479530 PLNP26678 52 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 LMO4P61968 165 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 TAL2Q16559 108 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 MYMXA0A1B0GTQ4 84 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 F8VRH5 84 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 CLEC19AQ6UXS0 136 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 A0A1B0GWB2 263 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 MINOS1Q5TGZ0 78 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 MINOS1-NBL1R4GNA1 71 aa10.14□□□□□ -0.79
PDZRN3-208ENST00000479530 OR11H12B2RN74 326 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 J3QR89 54 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 LGALS1P09382 135 aaKnown RBP10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 SMCPP49901 116 aaPredicted RBP10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 UCNP55089 124 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 OR11H2Q8NH07 326 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 ZNF502Q8TBZ5 544 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 CCDC140Q96MF4 163 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 H7C1H1 209 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 SMIM2Q9BVW6 85 aa10.13□□□□□ -0.79
PDZRN3-208ENST00000479530 RBAKDNA6NC62 111 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 TSPAN13O95857 204 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 UBE2E1P51965 193 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 PLEKHB2Q96CS7 222 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 SCGB3A1Q96QR1 104 aa10.12□□□□□ -0.79
PDZRN3-208ENST00000479530 ABCA2Q9BZC7 2435 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms