RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ORMDL3Q8N138 153 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 CCL17Q92583 94 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 SLC25A39Q9BZJ4 359 aaPredicted RBP6.51□□□□□ -1.37
VAPB-205ENST00000476395 TMEM133Q9H2Q1 129 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 TMEM14CQ9P0S9 112 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 TRBV6-1A0A0K0K1D8 114 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 CKS2P33552 79 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 RRN3P1Q2M238 152 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 TTC9CQ8N5M4 171 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 RNASE6Q93091 150 aaKnown RBP6.51□□□□□ -1.37
VAPB-205ENST00000476395 AJUBAQ96IF1 538 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
VAPB-205ENST00000476395 ARHGAP32A7KAX9 2087 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 IGHV1-3A0A0C4DH29 117 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 CCDC179H3BU77 68 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 DUX3Q96PT4 197 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 TMEM126AQ9H061 195 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 PKIGQ9Y2B9 76 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 S4R3C0 116 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 CACNA1BQ00975 2339 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 NDUFA3O95167 84 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 IGHG4P01861 327 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 RPL7P18124 248 aaKnown RBP6.5□□□□□ -1.37
VAPB-205ENST00000476395 CACNA1AO00555 2505 aa6.5□□□□□ -1.37
VAPB-205ENST00000476395 LYNX1G3V0Z9 82 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 BUB1B-PAK6H3BSN5 160 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 IGKCP01834 107 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 LYNX1P0DP58 116 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 PSMB2P49721 201 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 IGFL4Q6B9Z1 124 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 WNK2Q9Y3S1 2297 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 TRBV19A0A075B6N1 114 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 LOC107984156A0A0G2JMH3 177 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 TMEM78Q5T7P6 136 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 CFAP126Q5VTH2 177 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 Q6AWC8 147 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 ARL17AQ8IVW1 177 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 Q8TAT8 98 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 TWIST1Q15672 202 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 FAM19A5Q7Z5A7 132 aaPredicted RBP6.49□□□□□ -1.37
VAPB-205ENST00000476395 TEX29Q8N6K0 151 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 ZNF502Q8TBZ5 544 aa6.49□□□□□ -1.37
VAPB-205ENST00000476395 H3BRN7 92 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 NBR2O15453 112 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 RPL27AP46776 148 aaKnown RBP6.48□□□□□ -1.37
VAPB-205ENST00000476395 EFNA4P52798 201 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 KLRD1Q13241 179 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 PRR30Q53SZ7 412 aaPredicted RBP6.48□□□□□ -1.37
VAPB-205ENST00000476395 ZFAND6Q6FIF0 208 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 TMEM158Q8WZ71 300 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 OTORQ9NRC9 128 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 HIGD1BQ9P298 99 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 CUBNO60494 3623 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 NDUFB3O43676 98 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 CRLF1O75462 422 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 VMA21Q3ZAQ7 101 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 PPP1R27Q86WC6 154 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 ZNF491Q8N8L2 437 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 FBXL15Q9H469 300 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 RETNQ9HD89 108 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 U3KQK5 164 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 TRAV26-2A0A0B4J265 109 aa6.48□□□□□ -1.37
VAPB-205ENST00000476395 SUB1P53999 127 aaKnown RBP eCLIP6.48□□□□□ -1.37
VAPB-205ENST00000476395 KLF17Q5JT82 389 aaPredicted RBP6.48□□□□□ -1.37
VAPB-205ENST00000476395 LINC01549A6NIU2 74 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 H3BVH4 76 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 C6orf226Q5I0X4 101 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 SHANK2-AS3Q9BTD1 123 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 ZMAT4Q9H898 229 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 IGKV2-40A0A087WW87 121 aaPredicted RBP6.47□□□□□ -1.37
VAPB-205ENST00000476395 J3KT08 172 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 K7ENP7 123 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 IGKV2D-40P01614 121 aaPredicted RBP6.47□□□□□ -1.37
VAPB-205ENST00000476395 ZNF80P51504 273 aaPredicted RBP6.47□□□□□ -1.37
VAPB-205ENST00000476395 ZNF493Q6ZR52 646 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 KLK15Q9H2R5 256 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 CFAP46Q8IYW2 2715 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 TRBV7-3A0A075B6L6 115 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 MEIG1Q5JSS6 88 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 HIGD1AQ9Y241 93 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 CSMD2Q7Z408 3487 aa6.47□□□□□ -1.37
VAPB-205ENST00000476395 SH2D1AO60880 128 aa6.46□□□□□ -1.37
VAPB-205ENST00000476395 EGR2P11161 476 aaPredicted RBP6.46□□□□□ -1.37
VAPB-205ENST00000476395 RPL35AP18077 110 aaKnown RBP6.46□□□□□ -1.37
VAPB-205ENST00000476395 RNF185Q96GF1 192 aa6.46□□□□□ -1.37
VAPB-205ENST00000476395 FANCD2OSQ96PS1 177 aa6.46□□□□□ -1.37
VAPB-205ENST00000476395 SPRY2O43597 315 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 NDPQ00604 133 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 CDSNQ15517 529 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 COX8CQ7Z4L0 72 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 SMAD5-AS1Q9Y6J3 95 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 DPM2O94777 84 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 TTC32Q5I0X7 151 aa6.46□□□□□ -1.38
VAPB-205ENST00000476395 Q6ZQT7 251 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms