RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TRBV30A0A0K0K1B3 111 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 K7EMI3 77 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 NDUFC1O43677 76 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 PRSS1P07477 247 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 CFC1P0CG37 223 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 ODF3L2Q3SX64 289 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 SMIM14Q96QK8 99 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 TTTY13Q9BZ97 58 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 PHPT1Q9NRX4 125 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 TPRP12270 2363 aaKnown RBP4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 EXPH5Q8NEV8 1989 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 HCFC1P51610 2035 aa4.53□□□□□ -1.68
ECHDC1-215ENST00000475319 MUC3AQ02505 3323 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1D-42A0A075B6H8 117 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 TRAV12-1A0A0B4J245 112 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 SRRM4A7MD48 611 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 CCL21O00585 134 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 TIMM17BO60830 172 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1-5P01602 117 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 COX6CP09669 75 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 FHL2Q14192 279 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 DAZAP2Q15038 168 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 LY6G5BQ8NDX9 201 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 NUP37Q8NFH4 326 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 PGLYRP4Q96LB8 373 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 SPACA5Q96QH8 159 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 TM2D3Q9BRN9 247 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 SLC50A1Q9BRV3 221 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 RPP25Q9BUL9 199 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 CCL28Q9NRJ3 127 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 C2orf16Q68DN1 1984 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 KIAA1549Q9HCM3 1950 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 CACNA1IQ9P0X4 2223 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 OTOGLQ3ZCN5 2332 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 DOCK9Q9BZ29 2069 aa4.52□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1-9A0A0C4DH69 117 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RBMY1BA6NDE4 496 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RBMY1EA6NEQ0 496 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 LYRM9A8MSI8 78 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 NDUFS5O43920 106 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 IGLV2-14P01704 120 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RBMY1DP0C7P1 496 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RBMY1A1P0DJD3 496 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RBMY1CP0DJD4 496 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 DEFA4P12838 97 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 ZNF22P17026 224 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 ZNF137PP52743 207 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 CRIP2P52943 208 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 FGF12P61328 243 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 NUMA1Q14980 2115 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RBMY1FQ15415 496 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 LPAL2Q16609 132 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 Q6JHZ5 121 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 SCGB1D4Q6XE38 83 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 FGFBP3Q8TAT2 258 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 EEF1AKMT3Q96AZ1 226 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 DEPPQ9NTK1 212 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 MOB4Q9Y3A3 225 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 CEP250Q9BV73 2442 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 REV3LO60673 3130 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 TRPM6Q9BX84 2022 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 F5P12259 2224 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 LOC101059948A0A1B0GTJ6 334 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1-39P01597 117 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 IGLV3-27P01718 113 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 IGHV3-33P01772 117 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1D-39P04432 117 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 INAFM2P0DMQ5 153 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 RNASE2P10153 161 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 SUB1P53999 127 aaKnown RBP eCLIP4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 MIC13Q5XKP0 118 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 SFTA2Q6UW10 78 aa4.51□□□□□ -1.69
ECHDC1-215ENST00000475319 KIAA1549LQ6ZVL6 1849 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 XIRP2A4UGR9 3374 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 ACACBO00763 2458 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 FANCMQ8IYD8 2048 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 TRAV3A0A0B4J244 114 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1D-13A0A0B4J2D9 117 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 IQCF6A8MYZ5 107 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 H7C423 109 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 M0R135 149 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 PROP1O75360 226 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 CCKP06307 115 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1-13P0DP09 117 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 FHL5Q5TD97 284 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 ARRDC1-AS1Q9H2J1 176 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 RALGAPA1Q6GYQ0 2036 aa4.5□□□□□ -1.69
ECHDC1-215ENST00000475319 TRBV6-6A0A0A6YYG2 114 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 TRAV40A0A0B4J280 105 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 A0A1W2PQD3 144 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 ZNF815PA8K554 130 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 F8VRH5 84 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 IGLV3-1P01715 115 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 P0C879 139 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms