RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 IGKV6D-21A0A0A0MT36 114 aa2.53□□□□□ -2
UBR3-208ENST00000474426 IGLV9-49A0A0B4J1Y8 123 aa2.53□□□□□ -2
UBR3-208ENST00000474426 IGHV5-51A0A0C4DH38 117 aa2.53□□□□□ -2
UBR3-208ENST00000474426 PPYP01298 95 aa2.53□□□□□ -2
UBR3-208ENST00000474426 UBE2D1P51668 147 aa2.53□□□□□ -2
UBR3-208ENST00000474426 FGF12P61328 243 aa2.53□□□□□ -2
UBR3-208ENST00000474426 SYCNQ0VAF6 134 aa2.53□□□□□ -2
UBR3-208ENST00000474426 MPDZO75970 2070 aa2.53□□□□□ -2
UBR3-208ENST00000474426 HEATR5BQ9P2D3 2071 aa2.53□□□□□ -2
UBR3-208ENST00000474426 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.53□□□□□ -2
UBR3-208ENST00000474426 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
UBR3-208ENST00000474426 LOC107984156A0A0G2JMH3 177 aa2.53□□□□□ -2
UBR3-208ENST00000474426 PEX7O00628 323 aa2.53□□□□□ -2
UBR3-208ENST00000474426 GNLYP22749 145 aa2.53□□□□□ -2
UBR3-208ENST00000474426 ARL17AQ8IVW1 177 aa2.53□□□□□ -2
UBR3-208ENST00000474426 DUOX1Q9NRD9 1551 aa2.53□□□□□ -2.01
UBR3-208ENST00000474426 IGHV3OR16-13A0A075B7E8 117 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 C16orf90A8MZG2 172 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 ZNHIT1O43257 154 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 CXCL6P80162 114 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 C2orf83Q53S99 150 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 NUP37Q8NFH4 326 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 CLEC2BQ92478 149 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 C11orf52Q96A22 123 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 LINC00597Q9H2U6 94 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 ZNF503-AS2A6NEH8 195 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 LINC01549A6NIU2 74 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 C11orf94C9JXX5 98 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 BSPH1Q075Z2 132 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 GGNQ86UU5 652 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 TMEM61Q8N0U2 210 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 TRGV8A0A0C4DH27 118 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 UBE2AP49459 152 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 GNB1P62873 340 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 PSMG4Q5JS54 123 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 C1orf100Q5SVJ3 147 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 Q6ZRP5 223 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 C1orf229Q6ZS94 237 aaPredicted RBP2.52□□□□□ -2.01
UBR3-208ENST00000474426 CCL4L1Q8NHW4 92 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 V9GYV3 84 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 BCORQ6W2J9 1755 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 IGKV2D-26A0A0A0MRZ7 120 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 INAFM1C9JVW0 142 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 MGST1P10620 155 aaKnown RBP2.52□□□□□ -2.01
UBR3-208ENST00000474426 CD28P10747 220 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 ESRGQ1W209 222 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 ZNF678Q5SXM1 525 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 ADAMTSL4-AS1Q5T5F5 129 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 SLC25A2Q9BXI2 301 aa2.52□□□□□ -2.01
UBR3-208ENST00000474426 MUC22E2RYF6 1773 aaPredicted RBP2.51□□□□□ -2.01
UBR3-208ENST00000474426 TRBV10-2A0A0K0K1G8 114 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 B4DSR2 109 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 GNRH2O43555 120 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 SPINT3P49223 89 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 TTTY13Q9BZ97 58 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 CELA1Q9UNI1 258 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 LRRC37A3O60309 1634 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 CXCL17Q6UXB2 119 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 TAS2R4Q9NYW5 299 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 MDC1Q14676 2089 aaKnown RBP2.51□□□□□ -2.01
UBR3-208ENST00000474426 ESPL1Q14674 2120 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 NHSQ6T4R5 1651 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 TMEM30CPA0ZSE6 113 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 TWIST1Q15672 202 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 NDUFA11Q86Y39 141 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 DAND5Q8N907 189 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 ARID1AO14497 2285 aa2.51□□□□□ -2.01
UBR3-208ENST00000474426 C5orf67F2Z3F1 127 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 PIN1P1O15428 100 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 ZNF117Q03924 483 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 REG3GQ6UW15 175 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 C17orf82Q86X59 251 aaPredicted RBP2.5□□□□□ -2.01
UBR3-208ENST00000474426 LINC00269Q8N2A0 174 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 IFI27L1Q96BM0 104 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 SLC25A22Q9H936 323 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 ZNF580Q9UK33 172 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 IGHV3-20A0A0C4DH32 117 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 CISD3P0C7P0 127 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 S100A4P26447 101 aaKnown RBP2.5□□□□□ -2.01
UBR3-208ENST00000474426 CKS2P33552 79 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 CCL14Q16627 93 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 C11orf71Q6IPW1 123 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 SCXQ7RTU7 201 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 ADM2Q7Z4H4 148 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 NRACQ8N912 160 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 ATXN7L3BQ96GX2 97 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 ARHGAP32A7KAX9 2087 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 NUP214P35658 2090 aaPredicted RBP2.5□□□□□ -2.01
UBR3-208ENST00000474426 A0A0B4J2C4 111 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 C17orf51A8MQB3 221 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 PRB4P10163 310 aaPredicted RBP2.5□□□□□ -2.01
UBR3-208ENST00000474426 CLECL1Q8IZS7 167 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 FAM216BQ8N7L0 139 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 SRCAPQ6ZRS2 3230 aa2.5□□□□□ -2.01
UBR3-208ENST00000474426 SMIM27A0A1W2PRY6 76 aa2.49□□□□□ -2.01
UBR3-208ENST00000474426 F8WEM9 126 aa2.49□□□□□ -2.01
UBR3-208ENST00000474426 C3orf84H3BNL1 204 aa2.49□□□□□ -2.01
UBR3-208ENST00000474426 LEPROTO15243 131 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms