RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CTRLP40313 264 aa10.87□□□□□ -0.67
HIF3A-206ENST00000472815 PRR9Q5T870 116 aa10.87□□□□□ -0.67
HIF3A-206ENST00000472815 LYZL1Q6UWQ5 148 aa10.87□□□□□ -0.67
HIF3A-206ENST00000472815 FAM159AQ6UWV7 190 aa10.87□□□□□ -0.67
HIF3A-206ENST00000472815 NAGKQ9UJ70 344 aa10.87□□□□□ -0.67
HIF3A-206ENST00000472815 IGKV3D-20A0A0C4DH25 116 aa10.86□□□□□ -0.67
HIF3A-206ENST00000472815 H3BMM0 161 aa10.86□□□□□ -0.67
HIF3A-206ENST00000472815 IGKV3-20P01619 116 aa10.86□□□□□ -0.67
HIF3A-206ENST00000472815 CLUHP3Q96NS8 147 aa10.86□□□□□ -0.67
HIF3A-206ENST00000472815 A8MTW9 85 aa10.85□□□□□ -0.67
HIF3A-206ENST00000472815 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
HIF3A-206ENST00000472815 S100A4P26447 101 aaKnown RBP10.85□□□□□ -0.67
HIF3A-206ENST00000472815 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
HIF3A-206ENST00000472815 STHQ8IWL8 128 aa10.85□□□□□ -0.67
HIF3A-206ENST00000472815 MCRIP2Q9BUT9 160 aaKnown RBP10.85□□□□□ -0.67
HIF3A-206ENST00000472815 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 KNCNA6PVL3 124 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 ASIPP42127 132 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 NDUFA6P56556 154 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 SORL1Q92673 2214 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 AMBPP02760 352 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 OR5AL1P0C617 328 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 MED14OSP0DP75 135 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 NUTF2P61970 127 aaKnown RBP10.84□□□□□ -0.67
HIF3A-206ENST00000472815 CACNG7P62955 275 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 SPINK13Q1W4C9 94 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 ODF3L2Q3SX64 289 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 CNFNQ9BYD5 112 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 C11orf21Q9P2W6 132 aa10.84□□□□□ -0.67
HIF3A-206ENST00000472815 TRAV12-3A0A0B4J271 114 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 C5orf52A6NGY3 159 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 M0R2Z0 102 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 FRMD6-AS1P0C7T7 363 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
HIF3A-206ENST00000472815 TWIST1Q15672 202 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 ANXA2RQ3ZCQ2 193 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 AMTNQ6UX39 209 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 COL6A5A8TX70 2615 aa10.83□□□□□ -0.68
HIF3A-206ENST00000472815 LOC105371267A0A1B0GV96 52 aa10.82□□□□□ -0.68
HIF3A-206ENST00000472815 BEAN1Q3B7T3 259 aa10.82□□□□□ -0.68
HIF3A-206ENST00000472815 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
HIF3A-206ENST00000472815 GATD1Q8NB37 220 aa10.82□□□□□ -0.68
HIF3A-206ENST00000472815 AGRNO00468 2067 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 SNAI2O43623 268 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 TDRG1Q3Y452 100 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 MUC21Q5SSG8 566 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 DNLZQ5SXM8 178 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 ZNF493Q6ZR52 646 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 C20orf144Q9BQM9 153 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 SSBP4Q9BWG4 385 aaPredicted RBP10.81□□□□□ -0.68
HIF3A-206ENST00000472815 UBE2CO00762 179 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 ZNF324O75467 553 aaPredicted RBP10.81□□□□□ -0.68
HIF3A-206ENST00000472815 NTF3P20783 257 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 SLAQ13239 276 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 KIR3DS1Q14943 382 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 ZNF747Q9BV97 191 aa10.81□□□□□ -0.68
HIF3A-206ENST00000472815 TENM1Q9UKZ4 2725 aa10.8□□□□□ -0.68
HIF3A-206ENST00000472815 TRAV12-2A0A075B6T6 113 aa10.8□□□□□ -0.68
HIF3A-206ENST00000472815 H3BVH4 76 aa10.8□□□□□ -0.68
HIF3A-206ENST00000472815 C3orf56Q8N813 242 aa10.8□□□□□ -0.68
HIF3A-206ENST00000472815 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
HIF3A-206ENST00000472815 IGHV1OR15-1A0A075B7D0 117 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 CD7P09564 240 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 SRIP30626 198 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 KRTAP21-3Q3LHN1 58 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 OR10J3Q5JRS4 329 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 COA6Q5JTJ3 125 aaKnown RBP10.79□□□□□ -0.68
HIF3A-206ENST00000472815 C12orf54Q6X4T0 127 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 GTSCR1Q86UQ5 136 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 ZNF575Q86XF7 245 aa10.79□□□□□ -0.68
HIF3A-206ENST00000472815 TRGV11A0A075B6L2 103 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 IGHV4-4A0A075B6R2 117 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 INSP01308 110 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 HOXA5P20719 270 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 S100A2P29034 98 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 ZNF124Q15973 351 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 SHISA2Q6UWI4 295 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 Q6ZQT7 251 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 TMEM191AQ9H0A3 160 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 LOC102724200A0A096LPH7 203 aaPredicted RBP10.78□□□□□ -0.68
HIF3A-206ENST00000472815 SSTP61278 116 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 Q0VG73 95 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 KIAA1644Q3SXP7 199 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 TRPT1Q86TN4 253 aaKnown RBP10.78□□□□□ -0.68
HIF3A-206ENST00000472815 BAGE3Q86Y29 109 aa10.78□□□□□ -0.68
HIF3A-206ENST00000472815 STAB1Q9NY15 2570 aa10.77□□□□□ -0.69
HIF3A-206ENST00000472815 WFDC9Q8NEX5 89 aa10.77□□□□□ -0.69
HIF3A-206ENST00000472815 TIMM8BQ9Y5J9 83 aaPredicted RBP10.77□□□□□ -0.69
HIF3A-206ENST00000472815 MUC21A0A0G2JKD1 596 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 MUC21A0A140T8X8 626 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 GNRH2O43555 120 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 FXYD7P58549 80 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 FAM104BQ5XKR9 115 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 TMEM256Q8N2U0 113 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 OR10AG1Q8NH19 301 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 MDFIQ99750 246 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 C1QTNF4Q9BXJ3 329 aa10.76□□□□□ -0.69
HIF3A-206ENST00000472815 RBMY1BA6NDE4 496 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms