RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 COX8CQ7Z4L0 72 aa13.31□□□□□ -0.28
RRP1-202ENST00000471909 RAB37Q96AX2 223 aa13.31□□□□□ -0.28
RRP1-202ENST00000471909 SH2D1AO60880 128 aa13.31□□□□□ -0.28
RRP1-202ENST00000471909 ARL3P36405 182 aa13.31□□□□□ -0.28
RRP1-202ENST00000471909 RNF182Q8N6D2 247 aa13.31□□□□□ -0.28
RRP1-202ENST00000471909 KLK15Q9H2R5 256 aa13.31□□□□□ -0.28
RRP1-202ENST00000471909 PTPN13Q12923 2485 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 CSPG4Q6UVK1 2322 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 ZANQ9Y493 2812 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 PRAC2D3DTV9 90 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 BRI3O95415 125 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 CKS2P33552 79 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 PCP2Q8IVA1 136 aa13.3□□□□□ -0.28
RRP1-202ENST00000471909 FBLL1A6NHQ2 334 aaKnown RBP13.29□□□□□ -0.28
RRP1-202ENST00000471909 G3V4G9 280 aa13.29□□□□□ -0.28
RRP1-202ENST00000471909 H3BUA1 57 aa13.29□□□□□ -0.28
RRP1-202ENST00000471909 TGFAP01135 160 aa13.29□□□□□ -0.28
RRP1-202ENST00000471909 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
RRP1-202ENST00000471909 A0A1W2PPM0 123 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 SMKR1H3BMG3 65 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 NPYP01303 97 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 ERCC8Q13216 396 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 UNQ9165/PRO28630Q6UXU0 137 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 OR5A1Q8NGJ0 315 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 USMG5Q96IX5 58 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 SLC50A1Q9BRV3 221 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 SPCS1Q9Y6A9 102 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 TRAV8-2A0A0B4J237 113 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 IGHV3-11P01762 117 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 IGHV4-59P01825 116 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 PF4V1P10720 104 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 ZNF80P51504 273 aaPredicted RBP13.28□□□□□ -0.28
RRP1-202ENST00000471909 PRSS57Q6UWY2 283 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 LCNL1Q6ZST4 164 aa13.28□□□□□ -0.28
RRP1-202ENST00000471909 TMEM238C9JI98 176 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 TWIST1Q15672 202 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 RNF223E7ERA6 249 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 C8orf86Q6ZUL3 223 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 NEGR1Q7Z3B1 354 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 WFDC3Q8IUB2 231 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 DKK2Q9UBU2 259 aa13.27□□□□□ -0.29
RRP1-202ENST00000471909 ABCA12Q86UK0 2595 aa13.26□□□□□ -0.29
RRP1-202ENST00000471909 J3QLI3 93 aa13.26□□□□□ -0.29
RRP1-202ENST00000471909 FABP2P12104 132 aa13.26□□□□□ -0.29
RRP1-202ENST00000471909 CFHR3Q02985 330 aa13.26□□□□□ -0.29
RRP1-202ENST00000471909 NDUFA4O00483 81 aa13.25□□□□□ -0.29
RRP1-202ENST00000471909 GLMPQ8WWB7 406 aa13.25□□□□□ -0.29
RRP1-202ENST00000471909 RBAKDNA6NC62 111 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 TMEM95Q3KNT9 176 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 TM4SF20Q53R12 229 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 C18orf15Q96N68 181 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 NAV2Q8IVL1 2488 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 NPFFR1Q9GZQ6 430 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 MAP1LC3AQ9H492 121 aa13.24□□□□□ -0.29
RRP1-202ENST00000471909 SMIM13P0DJ93 91 aa13.23□□□□□ -0.29
RRP1-202ENST00000471909 BMI1P35226 326 aa13.23□□□□□ -0.29
RRP1-202ENST00000471909 IGHV4-31P0DP07 118 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 GCSHP23434 173 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 SAMD5Q5TGI4 173 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 DEFB113Q30KQ7 82 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 PSMG4Q5JS54 123 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 IL17RELQ6ZVW7 336 aa13.22□□□□□ -0.29
RRP1-202ENST00000471909 MRPL53Q96EL3 112 aaKnown RBP13.22□□□□□ -0.29
RRP1-202ENST00000471909 IGLC6P0CF74 106 aa13.21□□□□□ -0.29
RRP1-202ENST00000471909 LEPP41159 167 aa13.21□□□□□ -0.29
RRP1-202ENST00000471909 BEX4Q9NWD9 120 aaPredicted RBP13.21□□□□□ -0.29
RRP1-202ENST00000471909 GPHB5Q86YW7 130 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 PSMG3-AS1Q96PY0 264 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 HIGD1BQ9P298 99 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 ZNF580Q9UK33 172 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 FSHBP01225 129 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 SMIM17P0DL12 118 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 ODF1Q14990 250 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 Q5PR19 223 aa13.2□□□□□ -0.3
RRP1-202ENST00000471909 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 FCER1GP30273 86 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 FXYD2P54710 66 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 RNF185Q96GF1 192 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 MSRB1Q9NZV6 116 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 ORM1P02763 201 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 PRSS1P07477 247 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 C20orf173Q96LM9 149 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 CHAC1Q9BUX1 264 aa13.19□□□□□ -0.3
RRP1-202ENST00000471909 PSMB8P28062 276 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 SRSF2Q01130 221 aaKnown RBP13.18□□□□□ -0.3
RRP1-202ENST00000471909 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 NXT2Q9NPJ8 142 aaKnown RBP13.18□□□□□ -0.3
RRP1-202ENST00000471909 HHLA3Q9XRX5 114 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 MXRA5Q9NR99 2828 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 LINC01546A6NGU7 62 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 TMEM78Q5T7P6 136 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 C10orf99Q6UWK7 81 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 C9orf47Q6ZRZ4 202 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 C9orf139Q6ZV77 190 aa13.18□□□□□ -0.3
RRP1-202ENST00000471909 TTTY13Q9BZ97 58 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms