RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 RPL7L1Q6DKI1 246 aaKnown RBP2.29□□□□□ -2.04
SCN3A-207ENST00000471697 LINC00643Q86TS7 51 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 PCP2Q8IVA1 136 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 ZNF525Q8N782 197 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 C15orf56Q8N910 161 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 RMI2Q96E14 147 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 CSAG2Q9Y5P2 127 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 LY96Q9Y6Y9 160 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 KIAA2026Q5HYC2 2103 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 NACAE9PAV3 2078 aa2.29□□□□□ -2.04
SCN3A-207ENST00000471697 MON2Q7Z3U7 1717 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 ALS2Q96Q42 1657 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 CICQ96RK0 1608 aaPredicted RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 PHRF1Q9P1Y6 1649 aaKnown RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 ABCC8Q09428 1581 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 SLIT2O94813 1529 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 ASXL1Q8IXJ9 1541 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 MYO7AQ13402 2215 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 IGLV11-55A0A075B6I3 123 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV3-43A0A0B4J1X8 118 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 TRAV1-2A0A0B4J238 106 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 F2Z2F3 143 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 TMEM256-PLSCR3K7ERE1 68 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 CCL16O15467 120 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 IGLV3-25P01717 112 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 APCSP02743 223 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 P0C879 139 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 IGHV1-8P0DP01 117 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 CKS2P33552 79 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 CMC4P56277 68 aaPredicted RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 SNRPD3P62318 126 aaKnown RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 HIST1H4AP62805 103 aaKnown RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 FUT5Q11128 374 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 LPAL2Q16609 132 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 ASB16-AS1Q495Z4 193 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 DEFB121Q5J5C9 76 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 C6orf201Q7Z4U5 140 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 WFDC11Q8NEX6 87 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 ZC2HC1AQ96GY0 325 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 OPRPNQ99935 248 aaPredicted RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 TXNDC17Q9BRA2 123 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 CHCHD7Q9BUK0 85 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 NXT2Q9NPJ8 142 aaKnown RBP2.28□□□□□ -2.04
SCN3A-207ENST00000471697 IL36BQ9NZH7 164 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 ARL2-SNX15V9GYD0 113 aa2.28□□□□□ -2.04
SCN3A-207ENST00000471697 TJP1Q07157 1748 aa2.28□□□□□ -2.05
SCN3A-207ENST00000471697 MYOM1P52179 1685 aa2.28□□□□□ -2.05
SCN3A-207ENST00000471697 TOPAZ1Q8N9V7 1692 aa2.28□□□□□ -2.05
SCN3A-207ENST00000471697 ADGRB1O14514 1584 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 NEXMIFQ5QGS0 1516 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 PLXNA1Q9UIW2 1896 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 IGKV1-9A0A0C4DH69 117 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 hADV29S1A0JD25 119 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 FXYD1O00168 92 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 IGLV2-11P01706 119 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 PRH1P02810 166 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 PRM2P04554 102 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 ASAH2BP0C7U1 165 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 TLX1NBP0CAT3 122 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 UBE2AP49459 152 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 DYNLT3P51808 116 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 LINC01554Q52M75 96 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 NOXRED1Q6NXP6 359 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 ATP11AUNQ6ZP68 121 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 NTM-AS1Q6ZSK4 140 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 Q8N2B8 174 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 KLHL30-AS1Q8NEE0 82 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 LINC01006Q8NI28 216 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 C10orf105Q8TEF2 133 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 SPTSSAQ969W0 71 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 CHCHD1Q96BP2 118 aaKnown RBP2.27□□□□□ -2.05
SCN3A-207ENST00000471697 DYNLRB1Q9NP97 96 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 CMC2Q9NRP2 79 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 CRYBG1Q9Y4K1 1723 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 KDM6BO15054 1643 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 MED1Q15648 1581 aaPredicted RBP2.27□□□□□ -2.05
SCN3A-207ENST00000471697 THADAQ6YHU6 1953 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 SLIT1O75093 1534 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 PTPRSQ13332 1948 aa2.27□□□□□ -2.05
SCN3A-207ENST00000471697 COL27A1Q8IZC6 1860 aaPredicted RBP2.26□□□□□ -2.05
SCN3A-207ENST00000471697 BAZ2BQ9UIF8 2168 aaKnown RBP2.26□□□□□ -2.05
SCN3A-207ENST00000471697 PLXNB1O43157 2135 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 C5P01031 1676 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 C2orf70A6NJV1 201 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 M0R129 80 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 NUPR1O60356 82 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 NPYP01303 97 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 C1QAP02745 245 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 CFC1BP0CG36 223 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 CGB3P0DN86 165 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 CGB7P0DN87 165 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 CRIP2P52943 208 aaPredicted RBP2.26□□□□□ -2.05
SCN3A-207ENST00000471697 Q1RN00 199 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 FAM104BQ5XKR9 115 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 C2orf91Q6ZV80 131 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 C14orf178Q8N769 122 aaPredicted RBP2.26□□□□□ -2.05
SCN3A-207ENST00000471697 DAND5Q8N907 189 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 CLDND2Q8NHS1 167 aa2.26□□□□□ -2.05
SCN3A-207ENST00000471697 ITLN2Q8WWU7 325 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms