RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ZNF493Q6ZR52 646 aa7.85□□□□□ -1.15
NUP50-214ENST00000469163 IL17RELQ6ZVW7 336 aa7.85□□□□□ -1.15
NUP50-214ENST00000469163 PRO0628Q9UI54 55 aa7.85□□□□□ -1.15
NUP50-214ENST00000469163 ZNF256Q9Y2P7 627 aaPredicted RBP7.85□□□□□ -1.15
NUP50-214ENST00000469163 C3orf36Q3SXR2 165 aa7.84□□□□□ -1.15
NUP50-214ENST00000469163 Q6P435 159 aa7.84□□□□□ -1.15
NUP50-214ENST00000469163 PIP4P2Q8N4L2 257 aa7.84□□□□□ -1.15
NUP50-214ENST00000469163 OR9G1Q8NH87 305 aa7.84□□□□□ -1.15
NUP50-214ENST00000469163 IGLV3-1P01715 115 aa7.84□□□□□ -1.15
NUP50-214ENST00000469163 ABHD12Q8N2K0 398 aa7.84□□□□□ -1.15
NUP50-214ENST00000469163 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.83□□□□□ -1.16
NUP50-214ENST00000469163 KHDC1LQ5JSQ8 128 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 HCP5Q6MZN7 132 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 TREML4Q6UXN2 200 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 DSCAML1Q8TD84 2053 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 TMEM178BH3BS89 294 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 MALP21145 153 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 C10orf55Q5SWW7 151 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 HIST2H2BDQ6DRA6 164 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 JPT2Q9H910 190 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 NIPBLQ6KC79 2804 aaeCLIP7.83□□□□□ -1.16
NUP50-214ENST00000469163 FAM236DA0A1B0GTK5 79 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 C15orf62A8K5M9 175 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 FAM236CP0DP71 79 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 Q6ZS49 121 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 ATP5L2Q7Z4Y8 100 aa7.83□□□□□ -1.16
NUP50-214ENST00000469163 IGLV2-8P01709 118 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 ZNF134P52741 427 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 DLX6P56179 175 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 TMEM200BQ69YZ2 307 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 ZNRF2Q8NHG8 242 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
NUP50-214ENST00000469163 IFI27L1Q96BM0 104 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 AAMDCQ9H7C9 122 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 CTSZQ9UBR2 303 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 VPS13CQ709C8 3753 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 UBR5O95071 2799 aaPredicted RBP7.82□□□□□ -1.16
NUP50-214ENST00000469163 KRTAP10-9P60411 292 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 ZNF497Q6ZNH5 498 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 C11orf44Q8N8P7 122 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 DSCR8Q96T75 97 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 WDR83OSQ9Y284 106 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 RNF223E7ERA6 249 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 C15orf65H3BRN8 121 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 UQCRQO14949 82 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 PRSS1P07477 247 aa7.82□□□□□ -1.16
NUP50-214ENST00000469163 IFI27P40305 119 aaPredicted RBP7.82□□□□□ -1.16
NUP50-214ENST00000469163 LOXL1Q08397 574 aaPredicted RBP7.82□□□□□ -1.16
NUP50-214ENST00000469163 SLC25A20O43772 301 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
NUP50-214ENST00000469163 MORN3Q6PF18 240 aaPredicted RBP7.81□□□□□ -1.16
NUP50-214ENST00000469163 GAFA1Q96PS6 74 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 IGKV3-7A0A075B6H7 116 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 TRAV3A0A0B4J244 114 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 LINC00473A8K010 186 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 IGKV1-16P04430 117 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 NBPF19A0A087WUL8 3843 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 TCL1BO95988 128 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 IGHV3-23P01764 117 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 SAA2P0DJI9 122 aaPredicted RBP7.81□□□□□ -1.16
NUP50-214ENST00000469163 MIR17HGQ75NE6 70 aa7.81□□□□□ -1.16
NUP50-214ENST00000469163 RUSC1-AS1Q66K80 236 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 ODF3Q96PU9 254 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 MRPL20Q9BYC9 149 aaKnown RBP7.8□□□□□ -1.16
NUP50-214ENST00000469163 MAST4O15021 2626 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 MYMXA0A1B0GTQ4 84 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 TMEM167BQ9NRX6 74 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 TENM4Q6N022 2769 aa7.8□□□□□ -1.16
NUP50-214ENST00000469163 hADV29S1A0JD25 119 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 HERVK_113P61574 105 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 RNF152Q8N8N0 203 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 PMS2P5A8MQ11 134 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 CEMP1Q6PRD7 247 aaPredicted RBP7.79□□□□□ -1.16
NUP50-214ENST00000469163 LINC00336Q6ZUF6 198 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 EXOC3-AS1Q8N2X6 119 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 C7orf69Q9H7B7 122 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 FBN2P35556 2912 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 IGLV3-9A0A075B6K5 115 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 IGHV3OR16-13A0A075B7E8 117 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 IGHV3-74A0A0B4J1X5 117 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 TRAV40A0A0B4J280 105 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 NPIPB11E5RHQ5 1161 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 Q8N1Y9 231 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 MGST2Q99735 147 aa7.79□□□□□ -1.16
NUP50-214ENST00000469163 TRACP01848 142 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 APCP25054 2843 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 BAHCC1Q9P281 2608 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 FAM90A5PA8MXJ8 464 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 CRYGBP07316 175 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 CNTFRP26992 372 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 ECSCRQ19T08 205 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 C1orf195Q5TG92 126 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 Q8N7P7 452 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 OR11H6Q8NGC7 330 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 IL17DQ8TAD2 202 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
NUP50-214ENST00000469163 KRTAP27-1Q3LI81 207 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms