RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 ELOBQ15370 118 aa7.84□□□□□ -1.15
MSX1-202ENST00000468421 MORN3Q6PF18 240 aaPredicted RBP7.84□□□□□ -1.15
MSX1-202ENST00000468421 C1orf158Q8N1D5 194 aa7.84□□□□□ -1.15
MSX1-202ENST00000468421 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
MSX1-202ENST00000468421 GTSF1Q8WW33 167 aa7.84□□□□□ -1.15
MSX1-202ENST00000468421 IGHV1OR15-1A0A075B7D0 117 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 LOC102724200A0A096LPH7 203 aaPredicted RBP7.83□□□□□ -1.16
MSX1-202ENST00000468421 TGIF2-C20orf24A0A0A6YYL0 155 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 A0A1W2PPQ1 181 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 CXorf65A6NEN9 183 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 TYMSP04818 313 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 CXCL1P09341 107 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 NUTF2P61970 127 aaKnown RBP7.83□□□□□ -1.16
MSX1-202ENST00000468421 IMMP2LQ96T52 175 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 TUBA4BQ9H853 241 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 ZMAT5Q9UDW3 170 aaKnown RBP7.83□□□□□ -1.16
MSX1-202ENST00000468421 TP53TG3Q9ULZ0 132 aa7.83□□□□□ -1.16
MSX1-202ENST00000468421 HIGD1CA8MV81 97 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 GNRH2O43555 120 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 PRB2P02812 416 aaPredicted RBP7.82□□□□□ -1.16
MSX1-202ENST00000468421 PRM2P04554 102 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 IGLC6P0CF74 106 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
MSX1-202ENST00000468421 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 KPRPQ5T749 579 aaPredicted RBP7.82□□□□□ -1.16
MSX1-202ENST00000468421 FAM159AQ6UWV7 190 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 CSNK1G2-AS1Q8NCQ2 148 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 NUP35Q8NFH5 326 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 C20orf144Q9BQM9 153 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 GFRA4Q9GZZ7 299 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 CSTL1Q9H114 145 aa7.82□□□□□ -1.16
MSX1-202ENST00000468421 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 IGHV3OR16-12A0A075B7B8 117 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 XKRY2A2RUG3 117 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 COLCA2A8K830 154 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 H3BVH4 76 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 SPINK4O60575 86 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 S100PP25815 95 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 KCNIP4Q6PIL6 250 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 FER1L6-AS1Q8NA97 138 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 PGLYRP4Q96LB8 373 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 PYGO2Q9BRQ0 406 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 C1QTNF4Q9BXJ3 329 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 NAT8BQ9UHF3 227 aa7.81□□□□□ -1.16
MSX1-202ENST00000468421 FAM231BA6NCW3 169 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 A8MZ25 164 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 SPRY2O43597 315 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 ARMS2P0C7Q2 107 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 FRMD6-AS1P0C7T7 363 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 RNASE3P12724 160 aaKnown RBP7.8□□□□□ -1.16
MSX1-202ENST00000468421 CTRLP40313 264 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 ASIPP42127 132 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 FOXA3P55318 350 aaPredicted RBP7.8□□□□□ -1.16
MSX1-202ENST00000468421 DNLZQ5SXM8 178 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 LYZL1Q6UWQ5 148 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.8□□□□□ -1.16
MSX1-202ENST00000468421 LINC01587Q99440 93 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 LINC00467Q9BRT7 94 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 TPPP3Q9BW30 176 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 MUC4Q99102 2169 aa7.8□□□□□ -1.16
MSX1-202ENST00000468421 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 TRAV9-1A0A075B6T8 112 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 IGHV3-16A0A0C4DH30 117 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 MUC21A0A0G2JKD1 596 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 KIR2DL5BA0A0G2JN68 375 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 KIR2DL5BA0A0G2JPC4 375 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 MUC21A0A140T8X8 626 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 K7EIL1 84 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 SNAI2O43623 268 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 HTN1P15515 57 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 APOC4P55056 127 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 MRPL54Q6P161 138 aaKnown RBP7.79□□□□□ -1.16
MSX1-202ENST00000468421 KIR2DL5AQ8N109 375 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 TMEM256Q8N2U0 113 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 KIR2DL5BQ8NHK3 375 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 TMEM208Q9BTX3 173 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 SSBP4Q9BWG4 385 aaPredicted RBP7.79□□□□□ -1.16
MSX1-202ENST00000468421 MDFICQ9P1T7 246 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 GOLT1BQ9Y3E0 138 aa7.79□□□□□ -1.16
MSX1-202ENST00000468421 TIMM8BQ9Y5J9 83 aaPredicted RBP7.79□□□□□ -1.16
MSX1-202ENST00000468421 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 CBY3A6NI87 242 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 OR5AL1P0C617 328 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 AZU1P20160 251 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 S100A4P26447 101 aaKnown RBP7.78□□□□□ -1.16
MSX1-202ENST00000468421 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 ZNF705AQ6ZN79 300 aaPredicted RBP7.78□□□□□ -1.16
MSX1-202ENST00000468421 OR10AG1Q8NH19 301 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 BTF3L4Q96K17 158 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 FAM210BQ96KR6 192 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 SCRT2Q9NQ03 307 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 PKD1L1Q8TDX9 2849 aa7.78□□□□□ -1.16
MSX1-202ENST00000468421 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
MSX1-202ENST00000468421 A0A1B0GXF2 115 aa7.77□□□□□ -1.17
MSX1-202ENST00000468421 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
MSX1-202ENST00000468421 SSTP61278 116 aa7.77□□□□□ -1.17
MSX1-202ENST00000468421 C11orf72Q8NBR9 251 aa7.77□□□□□ -1.17
MSX1-202ENST00000468421 CNFNQ9BYD5 112 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms