RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.46
CLDN11-202ENST00000468358 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
CLDN11-202ENST00000468358 HIST1H2BAQ96A08 127 aa12.15□□□□□ -0.46
CLDN11-202ENST00000468358 KCNS1Q96KK3 526 aa12.15□□□□□ -0.46
CLDN11-202ENST00000468358 VPS13DQ5THJ4 4388 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 GNRH2O43555 120 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 C1QBP02746 253 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 UBE2G1P62253 170 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 RNF212Q495C1 297 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 SPXQ9BT56 116 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
CLDN11-202ENST00000468358 PAGE4O60829 102 aa12.13□□□□□ -0.47
CLDN11-202ENST00000468358 TYMSP04818 313 aa12.13□□□□□ -0.47
CLDN11-202ENST00000468358 ZNF80P51504 273 aaPredicted RBP12.13□□□□□ -0.47
CLDN11-202ENST00000468358 TDRG1Q3Y452 100 aa12.13□□□□□ -0.47
CLDN11-202ENST00000468358 EIF5AL1Q6IS14 154 aaKnown RBP12.13□□□□□ -0.47
CLDN11-202ENST00000468358 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
CLDN11-202ENST00000468358 IGLV2-18A0A075B6J9 118 aa12.12□□□□□ -0.47
CLDN11-202ENST00000468358 M0R2N4 97 aa12.12□□□□□ -0.47
CLDN11-202ENST00000468358 PFN1P07737 140 aaKnown RBP12.12□□□□□ -0.47
CLDN11-202ENST00000468358 Q86TA4 180 aa12.12□□□□□ -0.47
CLDN11-202ENST00000468358 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
CLDN11-202ENST00000468358 MUC4Q99102 2169 aa12.12□□□□□ -0.47
CLDN11-202ENST00000468358 KMT2AQ03164 3969 aa12.11□□□□□ -0.47
CLDN11-202ENST00000468358 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
CLDN11-202ENST00000468358 AKR1C3P42330 323 aa12.11□□□□□ -0.47
CLDN11-202ENST00000468358 CCL18P55774 89 aa12.11□□□□□ -0.47
CLDN11-202ENST00000468358 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
CLDN11-202ENST00000468358 FMC1Q96HJ9 113 aa12.1□□□□□ -0.47
CLDN11-202ENST00000468358 TCEAL7Q9BRU2 100 aa12.1□□□□□ -0.47
CLDN11-202ENST00000468358 C11orf21Q9P2W6 132 aa12.1□□□□□ -0.47
CLDN11-202ENST00000468358 TRGV4A0A0C4DH28 118 aa12.09□□□□□ -0.47
CLDN11-202ENST00000468358 M0R2P5 195 aa12.09□□□□□ -0.47
CLDN11-202ENST00000468358 RAB5CP51148 216 aa12.09□□□□□ -0.47
CLDN11-202ENST00000468358 SLC51BQ86UW2 128 aa12.09□□□□□ -0.47
CLDN11-202ENST00000468358 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
CLDN11-202ENST00000468358 TEX46H3BTG2 121 aa12.08□□□□□ -0.48
CLDN11-202ENST00000468358 PAX4O43316 350 aa12.08□□□□□ -0.48
CLDN11-202ENST00000468358 SFTA3P0C7M3 94 aa12.08□□□□□ -0.48
CLDN11-202ENST00000468358 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
CLDN11-202ENST00000468358 C9JCJ5 164 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 H3BNG1 76 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 FAM3BP58499 235 aaPredicted RBP12.07□□□□□ -0.48
CLDN11-202ENST00000468358 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 RASL10AQ92737 203 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 ZNF479Q96JC4 524 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 GNG13Q9P2W3 67 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
CLDN11-202ENST00000468358 SCO2A0A1W2PP80 73 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 ORM1P02763 201 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 S100A4P26447 101 aaKnown RBP12.06□□□□□ -0.48
CLDN11-202ENST00000468358 SULT1A2P50226 295 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 SLAQ13239 276 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 ZC2HC1AQ96GY0 325 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 HHLA3Q9XRX5 114 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 LINC00588Q9Y4M8 146 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 ICOSQ9Y6W8 199 aa12.06□□□□□ -0.48
CLDN11-202ENST00000468358 FHL2Q14192 279 aa12.05□□□□□ -0.48
CLDN11-202ENST00000468358 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
CLDN11-202ENST00000468358 C9orf62Q8N4C0 152 aa12.05□□□□□ -0.48
CLDN11-202ENST00000468358 MANBALQ9NQG1 85 aa12.05□□□□□ -0.48
CLDN11-202ENST00000468358 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 B4DEV8 164 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 M0R036 132 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 SH2D1AO60880 128 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 CRYBA4P53673 196 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 CCL20P78556 96 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 FAM162BQ5T6X4 162 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 NHLRC2Q8NBF2 726 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 DNAH6Q9C0G6 4158 aa12.04□□□□□ -0.48
CLDN11-202ENST00000468358 A0A096LPF7 62 aa12.03□□□□□ -0.48
CLDN11-202ENST00000468358 IGKV3D-20A0A0C4DH25 116 aa12.03□□□□□ -0.48
CLDN11-202ENST00000468358 TRBV6-1A0A0K0K1D8 114 aa12.03□□□□□ -0.48
CLDN11-202ENST00000468358 A0A1B0GVG6 124 aa12.03□□□□□ -0.48
CLDN11-202ENST00000468358 LTAP01374 205 aa12.03□□□□□ -0.48
CLDN11-202ENST00000468358 S100A9P06702 114 aaKnown RBP12.03□□□□□ -0.48
CLDN11-202ENST00000468358 ASIPP42127 132 aa12.03□□□□□ -0.48
CLDN11-202ENST00000468358 PCNPQ8WW12 178 aaKnown RBP12.03□□□□□ -0.48
CLDN11-202ENST00000468358 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
CLDN11-202ENST00000468358 IFNA1P01562 189 aa12.02□□□□□ -0.49
CLDN11-202ENST00000468358 ESRGQ1W209 222 aa12.02□□□□□ -0.49
CLDN11-202ENST00000468358 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
CLDN11-202ENST00000468358 C9orf85Q96MD7 179 aa12.02□□□□□ -0.49
CLDN11-202ENST00000468358 TMSB15BA0A087X1C1 80 aa12.01□□□□□ -0.49
CLDN11-202ENST00000468358 RNASE3P12724 160 aaKnown RBP12.01□□□□□ -0.49
CLDN11-202ENST00000468358 CRIP1P50238 77 aa12.01□□□□□ -0.49
CLDN11-202ENST00000468358 MRPL23Q16540 153 aaKnown RBP12.01□□□□□ -0.49
CLDN11-202ENST00000468358 GRIFINA4D1Z8 144 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 PGPEP1LA6NFU8 196 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 H3BVH4 76 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 GYPEP15421 78 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 ZNF506Q5JVG8 444 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 BAGE2Q86Y30 109 aa12□□□□□ -0.49
CLDN11-202ENST00000468358 EPPK1P58107 5090 aaKnown RBP12□□□□□ -0.49
CLDN11-202ENST00000468358 NBDYA0A0U1RRE5 68 aa11.99□□□□□ -0.49
CLDN11-202ENST00000468358 KRBOX1C9JBD0 128 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms