RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 A1L4Q6 167 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 FAM223BA6NKX1 122 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 MGPP08493 103 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 PCP2Q8IVA1 136 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 FAM223AQ8IWN6 122 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 FOXC2Q99958 501 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 NPFFR1Q9GZQ6 430 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 PRB1P04280 392 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 MSMBP08118 114 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 COX8AP10176 69 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 C12orf54Q6X4T0 127 aa12.47□□□□□ -0.41
SLX4-202ENST00000466154 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.41
SLX4-202ENST00000466154 PTPN13Q12923 2485 aa12.46□□□□□ -0.41
SLX4-202ENST00000466154 C10orf99Q6UWK7 81 aa12.46□□□□□ -0.41
SLX4-202ENST00000466154 COX8CQ7Z4L0 72 aa12.46□□□□□ -0.41
SLX4-202ENST00000466154 RHPN1-AS1Q9BWJ2 59 aa12.46□□□□□ -0.42
SLX4-202ENST00000466154 RBAKDNA6NC62 111 aa12.45□□□□□ -0.42
SLX4-202ENST00000466154 OR2K2Q8NGT1 345 aa12.45□□□□□ -0.42
SLX4-202ENST00000466154 ORAOV1Q8WV07 137 aa12.45□□□□□ -0.42
SLX4-202ENST00000466154 RAB37Q96AX2 223 aa12.45□□□□□ -0.42
SLX4-202ENST00000466154 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
SLX4-202ENST00000466154 C14orf178Q8N769 122 aaPredicted RBP12.45□□□□□ -0.42
SLX4-202ENST00000466154 IGHV7-4-1A0A0J9YVY3 117 aa12.44□□□□□ -0.42
SLX4-202ENST00000466154 PPBPP02775 128 aa12.44□□□□□ -0.42
SLX4-202ENST00000466154 GNRH2O43555 120 aa12.44□□□□□ -0.42
SLX4-202ENST00000466154 C9orf139Q6ZV77 190 aa12.44□□□□□ -0.42
SLX4-202ENST00000466154 PHLDA3Q9Y5J5 127 aa12.44□□□□□ -0.42
SLX4-202ENST00000466154 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 AMMECR1LQ6DCA0 310 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 LGALS9CQ6DKI2 356 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 TAX1BP3O14907 124 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 IGHV4-59P01825 116 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 UBE2V1Q13404 147 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 C9orf47Q6ZRZ4 202 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 C2orf91Q6ZV80 131 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 GTSCR1Q86UQ5 136 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 NXT2Q9NPJ8 142 aaKnown RBP12.43□□□□□ -0.42
SLX4-202ENST00000466154 GPHB5Q86YW7 130 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 U3KQE9 123 aa12.43□□□□□ -0.42
SLX4-202ENST00000466154 NDUFA4O00483 81 aa12.42□□□□□ -0.42
SLX4-202ENST00000466154 ANXA2RQ3ZCQ2 193 aa12.42□□□□□ -0.42
SLX4-202ENST00000466154 DUX5Q96PT3 197 aa12.42□□□□□ -0.42
SLX4-202ENST00000466154 SMIM17P0DL12 118 aa12.42□□□□□ -0.42
SLX4-202ENST00000466154 FCER1GP30273 86 aa12.42□□□□□ -0.42
SLX4-202ENST00000466154 CDKN1BP46527 198 aa12.42□□□□□ -0.42
SLX4-202ENST00000466154 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
SLX4-202ENST00000466154 NAV2Q8IVL1 2488 aa12.41□□□□□ -0.42
SLX4-202ENST00000466154 MYO9AB2RTY4 2548 aa12.41□□□□□ -0.42
SLX4-202ENST00000466154 IGHG2P01859 326 aa12.41□□□□□ -0.42
SLX4-202ENST00000466154 MEGF9Q9H1U4 602 aa12.41□□□□□ -0.42
SLX4-202ENST00000466154 TGFAP01135 160 aa12.41□□□□□ -0.42
SLX4-202ENST00000466154 A6NDX4 124 aa12.4□□□□□ -0.42
SLX4-202ENST00000466154 NEGR1Q7Z3B1 354 aa12.4□□□□□ -0.42
SLX4-202ENST00000466154 CNFNQ9BYD5 112 aa12.4□□□□□ -0.42
SLX4-202ENST00000466154 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
SLX4-202ENST00000466154 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
SLX4-202ENST00000466154 SONP18583 2426 aaKnown RBP12.4□□□□□ -0.42
SLX4-202ENST00000466154 K7EMI3 77 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 ASIPP42127 132 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 AP1S3Q96PC3 154 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 IGKV2D-26A0A0A0MRZ7 120 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 ZNF688P0C7X2 276 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 DEFB112Q30KQ8 113 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 DEFB125Q8N687 156 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 B4DSR2 109 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 SRSF2Q01130 221 aaKnown RBP12.39□□□□□ -0.43
SLX4-202ENST00000466154 C19orf54Q5BKX5 351 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 Q8N8P6 123 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 USMG5Q96IX5 58 aa12.39□□□□□ -0.43
SLX4-202ENST00000466154 TRAV8-6A0A0B4J262 113 aa12.38□□□□□ -0.43
SLX4-202ENST00000466154 CD5LO43866 347 aa12.38□□□□□ -0.43
SLX4-202ENST00000466154 LAGE3Q14657 143 aa12.38□□□□□ -0.43
SLX4-202ENST00000466154 ZC2HC1BQ5TFG8 222 aa12.38□□□□□ -0.43
SLX4-202ENST00000466154 LINC00477Q96M19 166 aa12.38□□□□□ -0.43
SLX4-202ENST00000466154 DAZ1Q9NQZ3 744 aaKnown RBP12.38□□□□□ -0.43
SLX4-202ENST00000466154 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
SLX4-202ENST00000466154 K7EP13 123 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 GCSHP23434 173 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
SLX4-202ENST00000466154 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 A0A0G2JLM5 398 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 IGKCP01834 107 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 FGF6P10767 208 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 ODF1Q14990 250 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 MRPL35Q9NZE8 188 aaKnown RBP12.37□□□□□ -0.43
SLX4-202ENST00000466154 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 F5H697 171 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 OVOL1O14753 267 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 HTN1P15515 57 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
SLX4-202ENST00000466154 NOTCH3Q9UM47 2321 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 TMEM238C9JI98 176 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 NDUFS8O00217 210 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 NRACQ8N912 160 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 JPT2Q9H910 190 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
SLX4-202ENST00000466154 AGRNO00468 2067 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms