RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 DPH3P1Q9H4G8 78 aa2.79□□□□□ -1.96
COL8A1-205ENST00000463753 NBEAQ8NFP9 2946 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 CEP250Q9BV73 2442 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-20A0A0C4DH32 117 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 TRBV10-2A0A0K0K1G8 114 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 NTN3O00634 580 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-205ENST00000463753 NGFP01138 241 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 TFF1P04155 84 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 WT1P19544 449 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-205ENST00000463753 PLNP26678 52 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 ZNF134P52741 427 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 PCBD1P61457 104 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 PAX8Q06710 450 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 Q86TA4 180 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 LINC00596Q86U02 117 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 ZCCHC24Q8N2G6 241 aaKnown RBP2.78□□□□□ -1.96
COL8A1-205ENST00000463753 FXYD5Q96DB9 178 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 AGPAT4-IT1Q9H0P7 198 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 SPANXCQ9NY87 97 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 INTS1Q8N201 2190 aaKnown RBP2.78□□□□□ -1.96
COL8A1-205ENST00000463753 DNAH3Q8TD57 4116 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 USF3Q68DE3 2245 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 CFAP54Q96N23 3096 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 A0A1W2PQD3 144 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 A0A1W2PR77 199 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 IGHV3-9P01782 118 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 TCRAP04437 139 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 CRYGSP22914 178 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 DUTP33316 252 aaKnown RBP2.78□□□□□ -1.96
COL8A1-205ENST00000463753 HOXA4Q00056 320 aaPredicted RBP2.78□□□□□ -1.96
COL8A1-205ENST00000463753 ERCC8Q13216 396 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 DOCK7Q96N67 2140 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 METTL26Q96S19 204 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 SHANK2-AS3Q9BTD1 123 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 Q9H3A6 140 aa2.78□□□□□ -1.96
COL8A1-205ENST00000463753 TRAV12-3A0A0B4J271 114 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 OOEPA6NGQ2 149 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 C12orf77C9JDV5 145 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 ATOX1O00244 68 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 CCL16O15467 120 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 SPINT2O43291 252 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 NPC2P61916 151 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 RHOHQ15669 191 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 C2orf83Q53S99 150 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 RPL39P5Q59GN2 51 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 ZNF542PQ5EBM4 170 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 TRAV8-3A0A0A6YYJ7 113 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 PRSS38A1L453 326 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM178BH3BS89 294 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 H7C423 109 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 SYNJ2BPP57105 145 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 IGLV3-21P80748 117 aaPredicted RBP2.77□□□□□ -1.97
COL8A1-205ENST00000463753 PLGLB1Q02325 96 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 FOXF2Q12947 444 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 ZNF497Q6ZNH5 498 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 SDIM1Q6ZPB5 146 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 Q6ZSR3 168 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 Q8N8P6 123 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 CLEC2BQ92478 149 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 IMUPQ9GZP8 106 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 MSRB1Q9NZV6 116 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 PEMTQ9UBM1 199 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 UNC79Q9P2D8 2635 aa2.77□□□□□ -1.97
COL8A1-205ENST00000463753 FASNP49327 2511 aaKnown RBP2.77□□□□□ -1.97
COL8A1-205ENST00000463753 TRBV6-6A0A0A6YYG2 114 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 TMEM89A2RUT3 159 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 F8VRH5 84 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 M0R3E3 92 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 SH2D1AO60880 128 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 ATP5G1P05496 136 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 TIRAPP58753 221 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PATE2Q6UY27 113 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PRIMA1Q86XR5 153 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 DEFB104AQ8WTQ1 72 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 S1PR3Q99500 378 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 GNG12Q9UBI6 72 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PLA2G2DQ9UNK4 145 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 U3KQK5 164 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PLCE1Q9P212 2302 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 A0A087WVE0 104 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGHV3-21A0A0B4J1V1 117 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 TRAV26-2A0A0B4J265 109 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IQCF6A8MYZ5 107 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 LINC01619G3V211 115 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 TRIAP1O43715 76 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGHV3-33P01772 117 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 PLA2G1BP04054 148 aaKnown RBP2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGHV4-34P06331 123 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 SS18Q15532 418 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 LINC00643Q86TS7 51 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 FAM223AQ8IWN6 122 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 NEXN-AS1Q8NBZ9 246 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 C8orf49Q96NF6 230 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 RPP25Q9BUL9 199 aaKnown RBP2.76□□□□□ -1.97
COL8A1-205ENST00000463753 FRYQ5TBA9 3013 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 IGKV3D-7A0A0C4DH55 119 aa2.76□□□□□ -1.97
COL8A1-205ENST00000463753 A0A0G2JNJ9 132 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms