RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 DEFB131AP59861 70 aa12.92□□□□□ -0.34
CDK11A-209ENST00000460465 FOXI2Q6ZQN5 318 aa12.92□□□□□ -0.34
CDK11A-209ENST00000460465 IGKV3-20P01619 116 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 PYY3Q5JQD4 70 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 MUC21A0A0G2JKD1 596 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 MUC21A0A140T8X8 626 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 KLLNB2CW77 178 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 PDZD11Q5EBL8 140 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 COA6Q5JTJ3 125 aaKnown RBP12.91□□□□□ -0.34
CDK11A-209ENST00000460465 MUC21Q5SSG8 566 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.91□□□□□ -0.34
CDK11A-209ENST00000460465 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 SPAG8Q99932 426 aaPredicted RBP12.91□□□□□ -0.34
CDK11A-209ENST00000460465 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
CDK11A-209ENST00000460465 CYSRT1A8MQ03 144 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 DUSP14O95147 198 aaKnown RBP12.9□□□□□ -0.34
CDK11A-209ENST00000460465 HIST3H2BBQ8N257 126 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 TRAV25A0A0B4J276 109 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 A0A1B0GW15 77 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 S100A2P29034 98 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 LEPP41159 167 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 CDPF1Q6NVV7 123 aa12.9□□□□□ -0.34
CDK11A-209ENST00000460465 FLNBO75369 2602 aaKnown RBP12.9□□□□□ -0.34
CDK11A-209ENST00000460465 AGRNO00468 2067 aa12.9□□□□□ -0.35
CDK11A-209ENST00000460465 WNK1Q9H4A3 2382 aa12.89□□□□□ -0.35
CDK11A-209ENST00000460465 OR4C46A6NHA9 309 aa12.89□□□□□ -0.35
CDK11A-209ENST00000460465 KNCNA6PVL3 124 aa12.89□□□□□ -0.35
CDK11A-209ENST00000460465 SRIP30626 198 aa12.89□□□□□ -0.35
CDK11A-209ENST00000460465 MAP6D1Q9H9H5 199 aa12.89□□□□□ -0.35
CDK11A-209ENST00000460465 ZNF256Q9Y2P7 627 aaPredicted RBP12.89□□□□□ -0.35
CDK11A-209ENST00000460465 GATD1Q8NB37 220 aa12.89□□□□□ -0.35
CDK11A-209ENST00000460465 SAP30O75446 220 aa12.88□□□□□ -0.35
CDK11A-209ENST00000460465 SETD2Q9BYW2 2564 aaPredicted RBP12.88□□□□□ -0.35
CDK11A-209ENST00000460465 M0R2Z0 102 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 ANXA2RQ3ZCQ2 193 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 TP53TG3Q9ULZ0 132 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 F8P00451 2351 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 F2Z2F3 143 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 HLA-DRB4P13762 266 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 AMTNQ6UX39 209 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 HLA-DRB4X5D2U9 266 aa12.87□□□□□ -0.35
CDK11A-209ENST00000460465 C7orf71A4D174 169 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 PF4P02776 101 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 NTF3P20783 257 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 DEFA6Q01524 100 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 Q0VG73 95 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 TWIST1Q15672 202 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 SPINK13Q1W4C9 94 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 BAHCC1Q9P281 2608 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 C2CD3Q4AC94 2353 aa12.86□□□□□ -0.35
CDK11A-209ENST00000460465 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 CDKN1BP46527 198 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 ALKBH7Q9BT30 221 aaPredicted RBP12.85□□□□□ -0.35
CDK11A-209ENST00000460465 SORL1Q92673 2214 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 LOC102724200A0A096LPH7 203 aaPredicted RBP12.85□□□□□ -0.35
CDK11A-209ENST00000460465 H3BMM0 161 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 TSPOP30536 169 aa12.85□□□□□ -0.35
CDK11A-209ENST00000460465 H3BVH4 76 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 OR10J3Q5JRS4 329 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 BAGE3Q86Y29 109 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 MSRB1Q9NZV6 116 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 A8MTW9 85 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 NUPR1O60356 82 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 ODF3L2Q3SX64 289 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 CBY1Q9Y3M2 126 aa12.84□□□□□ -0.35
CDK11A-209ENST00000460465 SNAI2O43623 268 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 ZNF324O75467 553 aaPredicted RBP12.83□□□□□ -0.36
CDK11A-209ENST00000460465 IGLV1-51P01701 117 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 OR5AL1P0C617 328 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 FABP4P15090 132 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 LINC00310P59036 64 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 LINC00482Q8N8I6 264 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 OR10AG1Q8NH19 301 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 C18orf32Q8TCD1 76 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 RBMY1BA6NDE4 496 aaKnown RBP12.83□□□□□ -0.36
CDK11A-209ENST00000460465 RBMY1EA6NEQ0 496 aaKnown RBP12.83□□□□□ -0.36
CDK11A-209ENST00000460465 GNRH2O43555 120 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 SERF1AO75920 110 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 RBMY1DP0C7P1 496 aaKnown RBP12.83□□□□□ -0.36
CDK11A-209ENST00000460465 ASIPP42127 132 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 FXYD7P58549 80 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 IQCJQ1A5X6 159 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 HIST1H2BLQ99880 126 aa12.83□□□□□ -0.36
CDK11A-209ENST00000460465 TIMM8BQ9Y5J9 83 aaPredicted RBP12.83□□□□□ -0.36
CDK11A-209ENST00000460465 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
CDK11A-209ENST00000460465 S100A4P26447 101 aaKnown RBP12.82□□□□□ -0.36
CDK11A-209ENST00000460465 AMN1Q8IY45 258 aa12.82□□□□□ -0.36
CDK11A-209ENST00000460465 AMBPP02760 352 aa12.81□□□□□ -0.36
CDK11A-209ENST00000460465 PCP4P48539 62 aa12.81□□□□□ -0.36
CDK11A-209ENST00000460465 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
CDK11A-209ENST00000460465 CITED1Q99966 193 aa12.81□□□□□ -0.36
CDK11A-209ENST00000460465 FAM104BQ5XKR9 115 aa12.8□□□□□ -0.36
CDK11A-209ENST00000460465 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
CDK11A-209ENST00000460465 C14orf144Q96I85 54 aa12.8□□□□□ -0.36
CDK11A-209ENST00000460465 DNLZQ5SXM8 178 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms