RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 TTTY13Q9BZ97 58 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 ODF3BA8MYP8 253 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 OOSP1A8MZH6 123 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 FSTL3O95633 263 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 IFI27P40305 119 aaPredicted RBP11.98□□□□□ -0.49
LMNB1-203ENST00000460265 DPF1Q92782 380 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 SIRPDQ9H106 197 aa11.98□□□□□ -0.49
LMNB1-203ENST00000460265 CENPVL3A0A0U1RRI6 287 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 TMEM78Q5T7P6 136 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 B5MCH6 92 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 SMKR1H3BMG3 65 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
LMNB1-203ENST00000460265 FAM106AQ4KMX7 169 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 TMEM14CQ9P0S9 112 aa11.97□□□□□ -0.49
LMNB1-203ENST00000460265 TRAV41A0A0B4J266 112 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 SH2D1AO60880 128 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 MYCNOSP40205 109 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 KLF12Q9Y4X4 402 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 UTP20O75691 2785 aaKnown RBP11.96□□□□□ -0.49
LMNB1-203ENST00000460265 TMEM95Q3KNT9 176 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 AMN1Q8IY45 258 aa11.96□□□□□ -0.49
LMNB1-203ENST00000460265 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.5
LMNB1-203ENST00000460265 PRRC2AP48634 2157 aaKnown RBP11.96□□□□□ -0.5
LMNB1-203ENST00000460265 CELSR1Q9NYQ6 3014 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 ARL3P36405 182 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 LGALS9BQ3B8N2 356 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 LGALS9CQ6DKI2 356 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 CHAC1Q9BUX1 264 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 TGFAP01135 160 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 HERV-K104P63124 156 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 C18orf15Q96N68 181 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 MLST8Q9BVC4 326 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 MT-ATP8P03928 68 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 LOXL1Q08397 574 aaPredicted RBP11.95□□□□□ -0.5
LMNB1-203ENST00000460265 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
LMNB1-203ENST00000460265 NPIPB6E9PJ23 425 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 OR11H12B2RN74 326 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 D6R8Y8 96 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 OR11H1Q8NG94 326 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 OR11H2Q8NH07 326 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 IGLL5B9A064 214 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 BLCAPP62952 87 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
LMNB1-203ENST00000460265 NACAE9PAV3 2078 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 PAX8Q06710 450 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 DKK2Q9UBU2 259 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 PRAC2D3DTV9 90 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 SPRY2O43597 315 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 TSPAN13O95857 204 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 GAGE5Q13069 117 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 GAGE6Q13070 117 aa11.93□□□□□ -0.5
LMNB1-203ENST00000460265 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
LMNB1-203ENST00000460265 DEFB1P60022 68 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 SPANXN1Q5VSR9 72 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 LYPD1Q8N2G4 141 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 PRR25Q96S07 402 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 ZNF492Q9P255 531 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 EVI2AP22794 236 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 IGHV1-69DA0A0B4J2H0 117 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 PRSS1P07477 247 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 ANXA2RQ3ZCQ2 193 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 PRORYQ9H606 182 aa11.92□□□□□ -0.5
LMNB1-203ENST00000460265 C19orf71A6NCJ1 209 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 E9PLD3 99 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 IL17RELQ6ZVW7 336 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 DEFB104AQ8WTQ1 72 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 EGR2P11161 476 aaPredicted RBP11.91□□□□□ -0.5
LMNB1-203ENST00000460265 CT83Q5H943 113 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 SMIM20Q8N5G0 67 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
LMNB1-203ENST00000460265 HAX1O00165 279 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 IGLV2-11P01706 119 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 HBDP02042 147 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 CRIP1P50238 77 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 PRSS22Q9GZN4 317 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 SIGLEC8Q9NYZ4 499 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 MSRB1Q9NZV6 116 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 HTN1P15515 57 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 PDE6HQ13956 83 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 ZNF502Q8TBZ5 544 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
LMNB1-203ENST00000460265 FOXI1Q12951 378 aa11.9□□□□□ -0.51
LMNB1-203ENST00000460265 ZANQ9Y493 2812 aa11.89□□□□□ -0.51
LMNB1-203ENST00000460265 CEND1Q8N111 149 aa11.89□□□□□ -0.51
LMNB1-203ENST00000460265 M0R381 172 aa11.89□□□□□ -0.51
LMNB1-203ENST00000460265 SFTA2Q6UW10 78 aa11.89□□□□□ -0.51
LMNB1-203ENST00000460265 GTSCR1Q86UQ5 136 aa11.89□□□□□ -0.51
LMNB1-203ENST00000460265 HIST1H4GQ99525 98 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms