RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 AAMDCQ9H7C9 122 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 GPN1Q9HCN4 374 aaPredicted RBP3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TRAV9-2A0A087WT02 112 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TRAV8-1A0A0A6YYK1 113 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV3-38A0A0C4DH36 116 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 C9JCJ5 164 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 OR7C2O60412 319 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RPL29P47914 159 aaKnown RBP3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 ZNF138P52744 262 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TAS2R30P59541 319 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 GNG5P63218 68 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 UBE2L3P68036 154 aaKnown RBP3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RAB31Q13636 194 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RAB32Q13637 225 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 VWC2Q2TAL6 325 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 OR10J3Q5JRS4 329 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TEX261Q6UWH6 196 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM75Q8N9X5 138 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 OR10G4Q8NGN3 311 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FXYD5Q96DB9 178 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 GGACTQ9BVM4 153 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MRPL32Q9BYC8 188 aaKnown RBP3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NUDT15Q9NV35 164 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM14CQ9P0S9 112 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 ZNF492Q9P255 531 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RNF24Q9Y225 148 aa3.98□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RNF213Q63HN8 5207 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 GNRH2O43555 120 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 H2AFB2P0C5Z0 115 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SULT1A1P50225 295 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RANP62826 216 aaKnown RBP3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PDE6HQ13956 83 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 ZNF266Q14584 549 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LRRC37A5PQ49AS3 106 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LINC01556Q5JQF7 62 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 DPPA3Q6W0C5 159 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 STX12Q86Y82 276 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM252Q8N6L7 170 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 OR4C5Q8NGB2 326 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NTN5Q8WTR8 489 aaPredicted RBP3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SGK494Q96LW2 274 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TXNDC17Q9BRA2 123 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MARVELD1Q9BSK0 173 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PAXXQ9BUH6 204 aa3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LYRM2Q9NU23 88 aaPredicted RBP3.97□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TRGV11A0A075B6L2 103 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TRAV4A0A0B4J268 109 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 KRTAP29-1A8MX34 341 aaPredicted RBP3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SIX6O95475 246 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 IGLV2-8P01709 118 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 ORM1P02763 201 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TYMSP04818 313 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 NBEAP1P0C6P0 100 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GATA1P15976 413 aaPredicted RBP3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 AKR1D1P51857 326 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 HNRNPA3P51991 378 aaKnown RBP3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 NHLH2Q02577 135 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FAM159AQ6UWV7 190 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 Q6ZSA8 131 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GOLT1AQ6ZVE7 132 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C10orf126Q8N4M7 172 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SLC25A29Q8N8R3 303 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 OR11H4Q8NGC9 324 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 OR5C1Q8NGR4 320 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RASL10AQ92737 203 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TVP23CQ96ET8 276 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 OR51M1Q9H341 326 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 Q9UF83 564 aa3.96□□□□□ -1.78
HLA-DPA3-207ENST00000454398 NAP1L6A6NFF2 107 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FBLL1A6NHQ2 334 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 IBA57-AS1B1ANH7 110 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TEX46H3BTG2 121 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 HMGB3O15347 200 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 MPC2O95563 127 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PLA2G1BP04054 148 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TCRBP04435 133 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 RPL35P42766 123 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 HBG1P69891 147 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 HBG2P69892 147 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SLAQ13239 276 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 LGALSLQ3ZCW2 172 aaPredicted RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 Q6AWC8 147 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 DAZ4Q86SG3 579 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C12orf45Q8N5I9 185 aaPredicted RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 BAALCQ8WXS3 180 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 SMIM3Q9BZL3 60 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 DAZ3Q9NR90 486 aaKnown RBP3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 OR5AC2Q9NZP5 309 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 C11orf21Q9P2W6 132 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PLA2G2DQ9UNK4 145 aa3.95□□□□□ -1.78
HLA-DPA3-207ENST00000454398 FXYD6-FXYD2A0A087WZ82 144 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 TRAV8-6A0A0B4J262 113 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 GAGE12JA6NER3 117 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 DIRC3C9JPN6 131 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 H0YIZ8 118 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 M0R2P5 195 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 NMBP08949 121 aa3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 PVALBP20472 110 aaPredicted RBP3.94□□□□□ -1.78
HLA-DPA3-207ENST00000454398 S100A11P31949 105 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms