RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FOXA3P55318 350 aaPredicted RBP9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 RPL19P84098 196 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 ANXA2RQ3ZCQ2 193 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 BTF3L4Q96K17 158 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 LINC01587Q99440 93 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 PYGO2Q9BRQ0 406 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 NAGKQ9UJ70 344 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TRAV9-1A0A075B6T8 112 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 IGHV1OR15-1A0A075B7D0 117 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TMSB15BA0A087X1C1 80 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 A0A1W2PPQ1 181 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 UBE2CO00762 179 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 SCO1O75880 301 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 CA1P00915 261 aaPredicted RBP9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 GIG44P09565 113 aaPredicted RBP9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TDRG1Q3Y452 100 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 KPRPQ5T749 579 aaPredicted RBP9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TMEM88Q6PEY1 159 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 Q6ZQT7 251 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 TMEM208Q9BTX3 173 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 NAT8BQ9UHF3 227 aa9.16□□□□□ -0.94
HLA-DPA1-244ENST00000453337 F2Z2F3 143 aa9.15□□□□□ -0.94
HLA-DPA1-244ENST00000453337 FAM3BP58499 235 aaPredicted RBP9.15□□□□□ -0.94
HLA-DPA1-244ENST00000453337 DNLZQ5SXM8 178 aa9.15□□□□□ -0.94
HLA-DPA1-244ENST00000453337 NEU1Q99519 415 aa9.15□□□□□ -0.94
HLA-DPA1-244ENST00000453337 URGCP-MRPS24S4R325 110 aa9.15□□□□□ -0.94
HLA-DPA1-244ENST00000453337 GRIFINA4D1Z8 144 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 HIGD1CA8MV81 97 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 GNRH2O43555 120 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 GZMBP10144 247 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 S100A4P26447 101 aaKnown RBP9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ASIPP42127 132 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ZNF575Q86XF7 245 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 CBLN2Q8IUK8 224 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 C1orf158Q8N1D5 194 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 FER1L6-AS1Q8NA97 138 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 CSNK1G2-AS1Q8NCQ2 148 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 BORCS7Q96B45 105 aa9.14□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TRGV11A0A075B6L2 103 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 CBY3A6NI87 242 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TCL1AP56279 114 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ELOBQ15370 118 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 WDR73Q6P4I2 378 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 GTSF1Q8WW33 167 aa9.13□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TRBV24-1A0A075B6N3 115 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 IGHV3OR16-12A0A075B7B8 117 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TYMSP04818 313 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 OR5AL1P0C617 328 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 IGLC6P0CF74 106 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 MED14OSP0DP75 135 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 HTN1P15515 57 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 LYZL1Q6UWQ5 148 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TPPP3Q9BW30 176 aa9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 SSBP4Q9BWG4 385 aaPredicted RBP9.12□□□□□ -0.95
HLA-DPA1-244ENST00000453337 A0A1B0GUT8 65 aa9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ARMS2P0C7Q2 107 aa9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RIGQ13278 110 aa9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ZNF705AQ6ZN79 300 aaPredicted RBP9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 Q6ZWC4 215 aa9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 YPEL4Q96NS1 127 aa9.11□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ANK2Q01484 3957 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 IGHV3-16A0A0C4DH30 117 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 A0A1B0GW15 77 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 SMIM9A6NGZ8 99 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 COLCA2A8K830 154 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 SNAI2O43623 268 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 CTRLP40313 264 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 CACNG7P62955 275 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 COX19Q49B96 90 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ATP5L2Q7Z4Y8 100 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 FAM210BQ96KR6 192 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TP53TG3Q9ULZ0 132 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 PHLDA3Q9Y5J5 127 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 MGAM2Q2M2H8 2515 aa9.1□□□□□ -0.95
HLA-DPA1-244ENST00000453337 MUC4Q99102 2169 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TGIF2-C20orf24A0A0A6YYL0 155 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 H3BVH4 76 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 SPINK4O60575 86 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 S100A8P05109 93 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 FRMD6-AS1P0C7T7 363 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RNASE3P12724 160 aaKnown RBP9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 ZNF415Q09FC8 603 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RASL11AQ6T310 242 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 RCHY1Q96PM5 261 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 SPXQ9BT56 116 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 MDFICQ9P1T7 246 aa9.09□□□□□ -0.95
HLA-DPA1-244ENST00000453337 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms