RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 TECTAO75443 2155 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 LINC01619G3V211 115 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 ARL3P36405 182 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 NUP37Q8NFH4 326 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 SMIM2Q9BVW6 85 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 VCX2Q9H322 139 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 C21orf62Q9NYP8 219 aa12.35□□□□□ -0.43
CNOT3-204ENST00000447684 TRAV12-1A0A0B4J245 112 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 C9JAW5 83 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 AJUBAQ96IF1 538 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 CCDC179H3BU77 68 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
CNOT3-204ENST00000447684 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 NHLRC4P0CG21 123 aaPredicted RBP12.34□□□□□ -0.43
CNOT3-204ENST00000447684 TTC32Q5I0X7 151 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
CNOT3-204ENST00000447684 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 M0R381 172 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 CD7P09564 240 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 ASCL5Q7RTU5 278 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 DYNLRB1Q9NP97 96 aa12.33□□□□□ -0.44
CNOT3-204ENST00000447684 DMXL1Q9Y485 3027 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 TRAV4A0A0B4J268 109 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 RASL10AQ92737 203 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 IGHV3-49A0A0A0MS15 119 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 TRPT1Q86TN4 253 aaKnown RBP12.32□□□□□ -0.44
CNOT3-204ENST00000447684 RPL39LQ96EH5 51 aaKnown RBP12.32□□□□□ -0.44
CNOT3-204ENST00000447684 FAM215AQ9Y5M1 114 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 GVINP1Q7Z2Y8 2422 aa12.32□□□□□ -0.44
CNOT3-204ENST00000447684 GAGE12JA6NER3 117 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 SLC25A20O43772 301 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 GAGE7O76087 117 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 NDUFV3P56181 108 aaKnown RBP12.31□□□□□ -0.44
CNOT3-204ENST00000447684 GAGE4Q13068 117 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 ORMDL2Q53FV1 153 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 FANCD2OSQ96PS1 177 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 ATMQ13315 3056 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 LYNX1G3V0Z9 82 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 CRLF1O75462 422 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 MGPP08493 103 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 LYNX1P0DP58 116 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 CRIP2P52943 208 aaPredicted RBP12.31□□□□□ -0.44
CNOT3-204ENST00000447684 SRSF2Q01130 221 aaKnown RBP12.31□□□□□ -0.44
CNOT3-204ENST00000447684 C1orf122Q6ZSJ8 110 aa12.31□□□□□ -0.44
CNOT3-204ENST00000447684 CFC1BP0CG36 223 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 CFC1P0CG37 223 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 Q6ZS46 218 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 AGPAT4-IT1Q9H0P7 198 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 MGAQ8IWI9 3026 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 F8W735 103 aaPredicted RBP12.3□□□□□ -0.44
CNOT3-204ENST00000447684 NBR2O15453 112 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 SUMO2P61956 95 aaKnown RBP12.3□□□□□ -0.44
CNOT3-204ENST00000447684 BSPH1Q075Z2 132 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 TOMM6Q96B49 74 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 CITED1Q99966 193 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 IGHV7-4-1A0A0J9YVY3 117 aa12.3□□□□□ -0.44
CNOT3-204ENST00000447684 PSMG3-AS1Q96PY0 264 aa12.29□□□□□ -0.44
CNOT3-204ENST00000447684 RHODO00212 210 aa12.29□□□□□ -0.44
CNOT3-204ENST00000447684 C10orf126Q8N4M7 172 aa12.29□□□□□ -0.44
CNOT3-204ENST00000447684 CDX4O14627 284 aaPredicted RBP12.28□□□□□ -0.44
CNOT3-204ENST00000447684 C14orf178Q8N769 122 aaPredicted RBP12.28□□□□□ -0.44
CNOT3-204ENST00000447684 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
CNOT3-204ENST00000447684 KAAG1Q9UBP8 84 aa12.28□□□□□ -0.44
CNOT3-204ENST00000447684 ARHGAP32A7KAX9 2087 aa12.28□□□□□ -0.44
CNOT3-204ENST00000447684 IGLV11-55A0A075B6I3 123 aa12.28□□□□□ -0.44
CNOT3-204ENST00000447684 A0A0J9YY99 117 aa12.28□□□□□ -0.44
CNOT3-204ENST00000447684 IFITM1P13164 125 aa12.28□□□□□ -0.44
CNOT3-204ENST00000447684 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
CNOT3-204ENST00000447684 C11orf86A6NJI1 115 aa12.27□□□□□ -0.44
CNOT3-204ENST00000447684 COX6B1P14854 86 aa12.27□□□□□ -0.44
CNOT3-204ENST00000447684 RPL32P62910 135 aaKnown RBP12.27□□□□□ -0.44
CNOT3-204ENST00000447684 Q1RN00 199 aa12.27□□□□□ -0.44
CNOT3-204ENST00000447684 DEFB109BQ30KR1 87 aa12.27□□□□□ -0.44
CNOT3-204ENST00000447684 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.44
CNOT3-204ENST00000447684 BEX4Q9NWD9 120 aaPredicted RBP12.27□□□□□ -0.44
CNOT3-204ENST00000447684 CTSGP08311 255 aa12.27□□□□□ -0.45
CNOT3-204ENST00000447684 SRD5A1P18405 259 aa12.27□□□□□ -0.45
CNOT3-204ENST00000447684 ABCA4P78363 2273 aa12.27□□□□□ -0.45
CNOT3-204ENST00000447684 MED13LQ71F56 2210 aa12.26□□□□□ -0.45
CNOT3-204ENST00000447684 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
CNOT3-204ENST00000447684 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
CNOT3-204ENST00000447684 HERVK_113P61574 105 aa12.26□□□□□ -0.45
CNOT3-204ENST00000447684 IGHV4-39P01824 125 aa12.26□□□□□ -0.45
CNOT3-204ENST00000447684 ZNF672Q499Z4 452 aaPredicted RBP12.26□□□□□ -0.45
CNOT3-204ENST00000447684 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
CNOT3-204ENST00000447684 SLC50A1Q9BRV3 221 aa12.26□□□□□ -0.45
CNOT3-204ENST00000447684 NDPQ00604 133 aa12.25□□□□□ -0.45
CNOT3-204ENST00000447684 SVEP1Q4LDE5 3571 aa12.25□□□□□ -0.45
CNOT3-204ENST00000447684 SCGB2A1O75556 95 aa12.25□□□□□ -0.45
CNOT3-204ENST00000447684 SBSPONQ8IVN8 264 aa12.25□□□□□ -0.45
CNOT3-204ENST00000447684 RNASE6Q93091 150 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms