RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 DEFB130BP0DP73 79 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 DEFB130AP0DP74 79 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 FOXE3Q13461 319 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 Q8N9W7 124 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 MORN3Q6PF18 240 aaPredicted RBP17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 TEX22C9J3V5 150 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 CD5LO43866 347 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 GAGE13Q4V321 117 aa17.55■□□□□ 0.4
CTDSPL-206ENST00000443503 IGHV3-16A0A0C4DH30 117 aa17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 CHD8Q9HCK8 2581 aa17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 TRAV8-2A0A0B4J237 113 aa17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 ESDP10768 282 aa17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 ZFP36P26651 326 aaKnown RBP17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 NUPR1O60356 82 aa17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 SMIM2Q9BVW6 85 aa17.54■□□□□ 0.4
CTDSPL-206ENST00000443503 CEP192Q8TEP8 1941 aa17.53■□□□□ 0.4
CTDSPL-206ENST00000443503 ELANEP08246 267 aa17.53■□□□□ 0.4
CTDSPL-206ENST00000443503 LINC00158P58513 81 aa17.53■□□□□ 0.4
CTDSPL-206ENST00000443503 UBE2V1Q13404 147 aa17.53■□□□□ 0.4
CTDSPL-206ENST00000443503 ZNF295-AS1Q8N0V1 137 aa17.53■□□□□ 0.4
CTDSPL-206ENST00000443503 LY6G5BQ8NDX9 201 aa17.53■□□□□ 0.4
CTDSPL-206ENST00000443503 SPRY2O43597 315 aa17.52■□□□□ 0.4
CTDSPL-206ENST00000443503 WIPF2Q8TF74 440 aaPredicted RBP17.52■□□□□ 0.4
CTDSPL-206ENST00000443503 FBXL19-AS1Q494R0 122 aa17.52■□□□□ 0.4
CTDSPL-206ENST00000443503 PRB1P04280 392 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 NRGNQ92686 78 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 MRPL35Q9NZE8 188 aaKnown RBP17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 RBMY1BA6NDE4 496 aaKnown RBP17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 RBMY1EA6NEQ0 496 aaKnown RBP17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 M0R2P5 195 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 RHODO00212 210 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 RBMY1DP0C7P1 496 aaKnown RBP17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 RBMY1A1P0DJD3 496 aaKnown RBP17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 RBMY1CP0DJD4 496 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 A8MWV9 139 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 DPH3Q96FX2 82 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 COX11Q9Y6N1 276 aa17.51■□□□□ 0.39
CTDSPL-206ENST00000443503 INS-IGF2F8WCM5 200 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 LGALS9BQ3B8N2 356 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 LGALS9CQ6DKI2 356 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 CFHR4Q92496 578 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 TIMM21Q9BVV7 248 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 PTPRSQ13332 1948 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 H3BUA1 57 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 MAJINQ3KP22 176 aa17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 C11orf68Q9H3H3 251 aaKnown RBP17.5■□□□□ 0.39
CTDSPL-206ENST00000443503 IGF2BP2-AS1Q96M15 143 aa17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 RNF114Q9Y508 228 aa17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 KLF2Q9Y5W3 355 aaPredicted RBP17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 PGPEP1Q9NXJ5 209 aa17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 VPREB3Q9UKI3 123 aa17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 GNRH2O43555 120 aa17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 BUB3O43684 328 aa17.49■□□□□ 0.39
CTDSPL-206ENST00000443503 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.48■□□□□ 0.39
CTDSPL-206ENST00000443503 DSCAMO60469 2012 aa17.48■□□□□ 0.39
CTDSPL-206ENST00000443503 CFHR3Q02985 330 aa17.48■□□□□ 0.39
CTDSPL-206ENST00000443503 RASL10AQ92737 203 aa17.48■□□□□ 0.39
CTDSPL-206ENST00000443503 TSPAN13O95857 204 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 C1orf229Q6ZS94 237 aaPredicted RBP17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 FRMD6-AS1P0C7T7 363 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 GATA1P15976 413 aaPredicted RBP17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 C10orf105Q8TEF2 133 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 GAGE12JA6NER3 117 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 GAGE1Q13065 139 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 GAGE4Q13068 117 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 GAGE5Q13069 117 aa17.47■□□□□ 0.39
CTDSPL-206ENST00000443503 DEFB136Q30KP8 78 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 ZNF747Q9BV97 191 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 MSRB1Q9NZV6 116 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 HOXD3P31249 432 aaPredicted RBP17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 PMVKQ15126 192 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 TMEM86BQ8N661 226 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 AJUBAQ96IF1 538 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 NUP210LQ5VU65 1888 aa17.46■□□□□ 0.39
CTDSPL-206ENST00000443503 CRPP02741 224 aa17.46■□□□□ 0.38
CTDSPL-206ENST00000443503 COX8AP10176 69 aa17.46■□□□□ 0.38
CTDSPL-206ENST00000443503 PRIMA1Q86XR5 153 aa17.46■□□□□ 0.38
CTDSPL-206ENST00000443503 ZNF625Q96I27 306 aaPredicted RBP17.46■□□□□ 0.38
CTDSPL-206ENST00000443503 CRYGCP07315 174 aa17.45■□□□□ 0.38
CTDSPL-206ENST00000443503 KLF5Q13887 457 aaPredicted RBP17.45■□□□□ 0.38
CTDSPL-206ENST00000443503 DKK2Q9UBU2 259 aa17.45■□□□□ 0.38
CTDSPL-206ENST00000443503 I3L3M4 83 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 Q71RC1 249 aaPredicted RBP17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 LENEPQ9Y5L5 61 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 IGHV3-38A0A0C4DH36 116 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 JMJD1CQ15652 2540 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 GAGE12BA1L429 117 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 C5orf56Q8N8D9 126 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 LINC00574Q9H8X3 128 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 PAX4O43316 350 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 CKS1BP61024 79 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 ATP6V0BQ99437 205 aa17.44■□□□□ 0.38
CTDSPL-206ENST00000443503 F8VRH5 84 aa17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 MRPL53Q96EL3 112 aaKnown RBP17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 TANC2Q9HCD6 1990 aa17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 J3QKU1 62 aa17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 GTSF1Q8WW33 167 aa17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 RBAKDNA6NC62 111 aa17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 C6orf226Q5I0X4 101 aa17.43■□□□□ 0.38
CTDSPL-206ENST00000443503 ZNF503Q96F45 646 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms