RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CFAP126Q5VTH2 177 aa7.94□□□□□ -1.14
SYNE2-206ENST00000441438 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-206ENST00000441438 ZFP92A6NM28 416 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 ZNHIT1O43257 154 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 EBLN2Q6P2I7 272 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 PHF5AQ7RTV0 110 aaKnown RBP7.93□□□□□ -1.14
SYNE2-206ENST00000441438 MYOZ3Q8TDC0 251 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 HDHD3Q9BSH5 251 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-206ENST00000441438 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-206ENST00000441438 PRR14LQ5THK1 2151 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 LINC00173Q6ZV60 143 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 TAF15Q92804 592 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE2-206ENST00000441438 SPRR3Q9UBC9 169 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 XCL2Q9UBD3 114 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 TP53TG3Q9ULZ0 132 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 LINC00588Q9Y4M8 146 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 NCOR2Q9Y618 2525 aa7.93□□□□□ -1.14
SYNE2-206ENST00000441438 A0A1W2PQD3 144 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 TMEM136Q6ZRR5 245 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 CYSTM1Q9H1C7 97 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 SCRT2Q9NQ03 307 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 PSPHP1O15172 72 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 ZNF20P17024 532 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 REG3AQ06141 175 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 RSPO1Q2MKA7 263 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-206ENST00000441438 ICE1Q9Y2F5 2266 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 SHANK1Q9Y566 2161 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 IGKV1-27A0A075B6S5 117 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 SERF1AO75920 110 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 SPINK2P20155 84 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 C2orf91Q6ZV80 131 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 CHAC1Q9BUX1 264 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 MRPL18Q9H0U6 180 aaKnown RBP7.92□□□□□ -1.14
SYNE2-206ENST00000441438 EPDR1Q9UM22 224 aa7.92□□□□□ -1.14
SYNE2-206ENST00000441438 IGHV6-1A0A0B4J1U7 121 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 IGHV3-15A0A0B4J1V0 119 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 RPL23P62829 140 aaKnown RBP7.91□□□□□ -1.14
SYNE2-206ENST00000441438 C11orf21Q9P2W6 132 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 IGKV3D-11A0A0A0MRZ8 115 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 GUSBP11Q6P575 273 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 C1orf229Q6ZS94 237 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-206ENST00000441438 FAM57AQ8TBR7 257 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 UPK3BQ9BT76 320 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 ESPL1Q14674 2120 aa7.91□□□□□ -1.14
SYNE2-206ENST00000441438 MPV17P39210 176 aa7.9□□□□□ -1.14
SYNE2-206ENST00000441438 CACNA1DQ01668 2161 aa7.9□□□□□ -1.14
SYNE2-206ENST00000441438 FAM57BQ71RH2 274 aa7.9□□□□□ -1.14
SYNE2-206ENST00000441438 ODF3Q96PU9 254 aa7.9□□□□□ -1.14
SYNE2-206ENST00000441438 HS3ST6Q96QI5 342 aa7.9□□□□□ -1.14
SYNE2-206ENST00000441438 IGKV1-5P01602 117 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 CRIP3Q6Q6R5 217 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 LYZL2Q7Z4W2 148 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 MGAQ8IWI9 3026 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 DOCK10Q96BY6 2186 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 ATMQ13315 3056 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 IGHV1-69DA0A0B4J2H0 117 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 IGLV3-1P01715 115 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-206ENST00000441438 VSIG2Q96IQ7 327 aa7.89□□□□□ -1.15
SYNE2-206ENST00000441438 ACACBO00763 2458 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 IGKV1-9A0A0C4DH69 117 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 MFAP2P55001 183 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 UBE2G1P62253 170 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 LINC00242Q5T6M2 205 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 IGFL3Q6UXB1 125 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 TMEM252Q8N6L7 170 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 SPENQ96T58 3664 aaKnown RBP7.88□□□□□ -1.15
SYNE2-206ENST00000441438 ROS1P08922 2347 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 KIAA2026Q5HYC2 2103 aa7.88□□□□□ -1.15
SYNE2-206ENST00000441438 BUB1B-PAK6H3BSN5 160 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 FBXL19-AS1Q494R0 122 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 HIGD1BQ9P298 99 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 TRAV2A0A0B4J234 112 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 ATOX1O00244 68 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 TIMM17BO60830 172 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 MRPS36P82909 103 aaKnown RBP7.87□□□□□ -1.15
SYNE2-206ENST00000441438 KISS1Q15726 138 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 DMXL2Q8TDJ6 3036 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 MED13Q9UHV7 2174 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 NXPH4O95158 308 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 IL3RAP26951 378 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 CYP2G1PQ6ZSU1 146 aa7.87□□□□□ -1.15
SYNE2-206ENST00000441438 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 GNLYP22749 145 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 RNASE6Q93091 150 aaKnown RBP7.86□□□□□ -1.15
SYNE2-206ENST00000441438 TRAPPC1Q9Y5R8 145 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 K7EQD1 137 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 COX7A2P2O60397 106 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 PATE4P0C8F1 98 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 ZNF138P52744 262 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 USP24Q9UPU5 2620 aa7.86□□□□□ -1.15
SYNE2-206ENST00000441438 GPHB5Q86YW7 130 aa7.85□□□□□ -1.15
SYNE2-206ENST00000441438 Q9H3A6 140 aa7.85□□□□□ -1.15
SYNE2-206ENST00000441438 HILPDAQ9Y5L2 63 aa7.85□□□□□ -1.15
SYNE2-206ENST00000441438 LHFPL6Q9Y693 200 aa7.85□□□□□ -1.15
SYNE2-206ENST00000441438 CACNA1BQ00975 2339 aa7.85□□□□□ -1.15
SYNE2-206ENST00000441438 SMG1Q96Q15 3661 aaKnown RBP7.85□□□□□ -1.15
SYNE2-206ENST00000441438 TRAV17A0A0B4J275 112 aa7.85□□□□□ -1.15
SYNE2-206ENST00000441438 NKAPP1Q8N9T2 125 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms