RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CLEC19AQ6UXS0 136 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 HIF1ANQ9NWT6 349 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 LOC107984156A0A0G2JMH3 177 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 H3BVH4 76 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 C19orf84I3L1E1 186 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 SIVA1O15304 175 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 BUB3O43684 328 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 LMO4P61968 165 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 ARL17AQ8IVW1 177 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 GLMPQ8WWB7 406 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 PRELID3AQ96N28 172 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 LINC00527Q9UJ94 153 aa8.03□□□□□ -1.12
CLSTN1-203ENST00000435891 TRBV20-1A0A075B6N2 111 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 PRSS1P07477 247 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 COX8CQ7Z4L0 72 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 TMEM219Q86XT9 240 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 TEX29Q8N6K0 151 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 SPATA25Q9BR10 227 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 NPYP01303 97 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 UBE2E1P51965 193 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 TWIST1Q15672 202 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 Q6ZQT7 251 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 FAM110DQ8TAY7 271 aaPredicted RBP8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 FLNCQ14315 2725 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 TGFAP01135 160 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 U3KQK5 164 aa8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 UTP20O75691 2785 aaKnown RBP8.02□□□□□ -1.13
CLSTN1-203ENST00000435891 ORM1P02763 201 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 IGLC6P0CF74 106 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 IL17RELQ6ZVW7 336 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 ORMDL3Q8N138 153 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 PRSS29PA6NIE9 313 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 ZFAND6Q6FIF0 208 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 C1QTNF4Q9BXJ3 329 aa8.01□□□□□ -1.13
CLSTN1-203ENST00000435891 CENPVL3A0A0U1RRI6 287 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 PAX8Q06710 450 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 TMEM190Q8WZ59 177 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 HIST1H4GQ99525 98 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 C11orf21Q9P2W6 132 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 PKD1L2Q7Z442 2459 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 OR11H12B2RN74 326 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 EFNA4P52798 201 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 OR11H1Q8NG94 326 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 OR11H2Q8NH07 326 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 CHAC1Q9BUX1 264 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 CKS2P33552 79 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 RNF185Q96GF1 192 aa8□□□□□ -1.13
CLSTN1-203ENST00000435891 GATA1P15976 413 aaPredicted RBP7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 TTC32Q5I0X7 151 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 FOXI2Q6ZQN5 318 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 TRAV8-2A0A0B4J237 113 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 AGPAT4-IT1Q9H0P7 198 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 NPFFO15130 113 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 FGF6P10767 208 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 GTSCR1Q86UQ5 136 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 ERG28Q9UKR5 140 aa7.99□□□□□ -1.13
CLSTN1-203ENST00000435891 IGKV3D-20A0A0C4DH25 116 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 PSMB2P49721 201 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 BRD3OSQ6XYD6 125 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 C3orf56Q8N813 242 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 C5orf56Q8N8D9 126 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 ITLN2Q8WWU7 325 aaPredicted RBP7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 DKK2Q9UBU2 259 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.98□□□□□ -1.133e-8■■■□□ 17.1
CLSTN1-203ENST00000435891 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 EVI2AP22794 236 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 PTH2Q96A98 100 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 IGLL5B9A064 214 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 IFI27L1Q96BM0 104 aa7.98□□□□□ -1.13
CLSTN1-203ENST00000435891 TSPAN13O95857 204 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 XGP55808 180 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 RPL32P62910 135 aaKnown RBP7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 Q6ZUT4 128 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 ID1P41134 155 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 TRBV12-3P01733 135 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 IGHV4-39P01824 125 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 TRGV3P03979 118 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 FOXI1Q12951 378 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 PIFOQ8TCI5 191 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 CSPG4Q6UVK1 2322 aa7.97□□□□□ -1.13
CLSTN1-203ENST00000435891 AGRNO00468 2067 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 HBDP02042 147 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 DEFB1P60022 68 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 KLK9Q2XQG4 91 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 CNFNQ9BYD5 112 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 TMEM160Q9NX00 188 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 KLK9Q9UKQ9 250 aa7.96□□□□□ -1.13
CLSTN1-203ENST00000435891 USP9XQ93008 2570 aaPredicted RBP7.96□□□□□ -1.14
CLSTN1-203ENST00000435891 IGF1P05019 195 aa7.96□□□□□ -1.14
CLSTN1-203ENST00000435891 GNLYP22749 145 aa7.96□□□□□ -1.14
CLSTN1-203ENST00000435891 LINC01559Q495D7 138 aa7.96□□□□□ -1.14
CLSTN1-203ENST00000435891 SPRY2O43597 315 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 EEF1AKMT3Q96AZ1 226 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 ZANQ9Y493 2812 aa7.95□□□□□ -1.14
CLSTN1-203ENST00000435891 GAGE12JA6NER3 117 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms