RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 SFRP2Q96HF1 295 aa16.82■□□□□ 0.28
SMARCAL1-208ENST00000434435 SPATA25Q9BR10 227 aa16.82■□□□□ 0.28
SMARCAL1-208ENST00000434435 OSTCQ9NRP0 149 aa16.82■□□□□ 0.28
SMARCAL1-208ENST00000434435 TMEM189A5PLL7 270 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 CBY3A6NI87 242 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 HTN1P15515 57 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 TDRG1Q3Y452 100 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 C15orf54Q8N8G6 183 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 OR11H2Q8NH07 326 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 NEU1Q99519 415 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 TM2D3Q9BRN9 247 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 OVOL2Q9BRP0 275 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 RETNQ9HD89 108 aa16.81■□□□□ 0.28
SMARCAL1-208ENST00000434435 IGKV3D-20A0A0C4DH25 116 aa16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 SMIM9A6NGZ8 99 aa16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 ZNF705GA8MUZ8 300 aaPredicted RBP16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 GATCO43716 136 aaKnown RBP16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 APOC3P02656 99 aa16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 RRN3P1Q2M238 152 aa16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 OR2D3Q8NGH3 330 aa16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 RPP21Q9H633 154 aaKnown RBP16.8■□□□□ 0.28
SMARCAL1-208ENST00000434435 MEGF8Q7Z7M0 2845 aa16.79■□□□□ 0.28
SMARCAL1-208ENST00000434435 TRGV11A0A075B6L2 103 aa16.79■□□□□ 0.28
SMARCAL1-208ENST00000434435 RPL19P84098 196 aaKnown RBP16.79■□□□□ 0.28
SMARCAL1-208ENST00000434435 OR10G8Q8NGN5 311 aa16.79■□□□□ 0.28
SMARCAL1-208ENST00000434435 X6R8D5 127 aa16.79■□□□□ 0.28
SMARCAL1-208ENST00000434435 TMSB15BA0A087X1C1 80 aa16.78■□□□□ 0.28
SMARCAL1-208ENST00000434435 TYMSP04818 313 aa16.78■□□□□ 0.28
SMARCAL1-208ENST00000434435 RPS20P60866 119 aaKnown RBP16.78■□□□□ 0.28
SMARCAL1-208ENST00000434435 NBEAL2Q6ZNJ1 2754 aa16.77■□□□□ 0.28
SMARCAL1-208ENST00000434435 XKRY2A2RUG3 117 aa16.77■□□□□ 0.28
SMARCAL1-208ENST00000434435 CXCL1P09341 107 aa16.77■□□□□ 0.28
SMARCAL1-208ENST00000434435 SVBPQ8N300 66 aa16.77■□□□□ 0.28
SMARCAL1-208ENST00000434435 ZMAT4Q9H898 229 aa16.77■□□□□ 0.28
SMARCAL1-208ENST00000434435 TP53TG3Q9ULZ0 132 aa16.77■□□□□ 0.28
SMARCAL1-208ENST00000434435 PPP1R2P9O14990 202 aa16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 MT-ND4LP03901 98 aa16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 PRM2P04554 102 aa16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 MIFP14174 115 aa16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 CT83Q5H943 113 aa16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 TMEM263Q8WUH6 116 aaKnown RBP16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 C16orf74Q96GX8 76 aa16.76■□□□□ 0.27
SMARCAL1-208ENST00000434435 GNRH2O43555 120 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 AZU1P20160 251 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 ASIPP42127 132 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 ZNF415Q09FC8 603 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 RNF212Q495C1 297 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 ZNF493Q6ZR52 646 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 CLRN3Q8NCR9 226 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 V9GYV3 84 aa16.75■□□□□ 0.27
SMARCAL1-208ENST00000434435 GRIFINA4D1Z8 144 aa16.74■□□□□ 0.27
SMARCAL1-208ENST00000434435 SNAPINO95295 136 aa16.74■□□□□ 0.27
SMARCAL1-208ENST00000434435 S100A4P26447 101 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-208ENST00000434435 RNASE8Q8TDE3 154 aaKnown RBP16.74■□□□□ 0.27
SMARCAL1-208ENST00000434435 ANAPC16Q96DE5 110 aa16.74■□□□□ 0.27
SMARCAL1-208ENST00000434435 IGHV3-16A0A0C4DH30 117 aa16.73■□□□□ 0.27
SMARCAL1-208ENST00000434435 A8MWL6 223 aa16.73■□□□□ 0.27
SMARCAL1-208ENST00000434435 RHEBQ15382 184 aa16.73■□□□□ 0.27
SMARCAL1-208ENST00000434435 DNLZQ5SXM8 178 aa16.73■□□□□ 0.27
SMARCAL1-208ENST00000434435 IGHV4-28A0A0C4DH34 117 aa16.72■□□□□ 0.27
SMARCAL1-208ENST00000434435 Q8NAQ8 132 aa16.72■□□□□ 0.27
SMARCAL1-208ENST00000434435 SNURFLB1AK76 121 aa16.71■□□□□ 0.27
SMARCAL1-208ENST00000434435 NHLRC4P0CG21 123 aaPredicted RBP16.71■□□□□ 0.27
SMARCAL1-208ENST00000434435 GZMBP10144 247 aa16.71■□□□□ 0.27
SMARCAL1-208ENST00000434435 C11orf72Q8NBR9 251 aa16.71■□□□□ 0.27
SMARCAL1-208ENST00000434435 MDFICQ9P1T7 246 aa16.71■□□□□ 0.27
SMARCAL1-208ENST00000434435 C7orf77A4D0Y5 90 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 H3BVH4 76 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 ATP6V1G1O75348 118 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 TCL1AP56279 114 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 ZNF575Q86XF7 245 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 TSKUQ8WUA8 353 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 CTDSP1Q9GZU7 261 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 GSN-AS1Q9NRJ2 163 aa16.7■□□□□ 0.26
SMARCAL1-208ENST00000434435 MED14OSP0DP75 135 aa16.69■□□□□ 0.26
SMARCAL1-208ENST00000434435 RNASE3P12724 160 aaKnown RBP16.69■□□□□ 0.26
SMARCAL1-208ENST00000434435 FER1L6-AS1Q8NA97 138 aa16.69■□□□□ 0.26
SMARCAL1-208ENST00000434435 IL36BQ9NZH7 164 aa16.69■□□□□ 0.26
SMARCAL1-208ENST00000434435 TIMM8BQ9Y5J9 83 aaPredicted RBP16.69■□□□□ 0.26
SMARCAL1-208ENST00000434435 MUC4Q99102 2169 aa16.69■□□□□ 0.26
SMARCAL1-208ENST00000434435 IL17DQ8TAD2 202 aa16.68■□□□□ 0.26
SMARCAL1-208ENST00000434435 C9orf85Q96MD7 179 aa16.68■□□□□ 0.26
SMARCAL1-208ENST00000434435 GFRA4Q9GZZ7 299 aa16.68■□□□□ 0.26
SMARCAL1-208ENST00000434435 RPS10P5Q9NQ39 176 aa16.68■□□□□ 0.26
SMARCAL1-208ENST00000434435 A0A087WWC5 75 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 A0A1W2PPQ1 181 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 PLAC8L1A1L4L8 177 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 ARMS2P0C7Q2 107 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 IGLC6P0CF74 106 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 EMP1P54849 157 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 SPXQ9BT56 116 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 TPPP3Q9BW30 176 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 C11orf68Q9H3H3 251 aaKnown RBP16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 TENM3Q9P273 2699 aa16.67■□□□□ 0.26
SMARCAL1-208ENST00000434435 FAM231BA6NCW3 169 aa16.66■□□□□ 0.26
SMARCAL1-208ENST00000434435 SNAI2O43623 268 aa16.66■□□□□ 0.26
SMARCAL1-208ENST00000434435 OR5AL1P0C617 328 aa16.66■□□□□ 0.26
SMARCAL1-208ENST00000434435 DEFB4AO15263 64 aa16.65■□□□□ 0.26
SMARCAL1-208ENST00000434435 S100A1P23297 94 aa16.65■□□□□ 0.26
SMARCAL1-208ENST00000434435 DAZ2Q13117 558 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms