RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 HERV-K104P63124 156 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 ZNF506Q5JVG8 444 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 TMEM75Q8N9X5 138 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 SMR3AQ99954 134 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 OSTCQ9NRP0 149 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 ERG28Q9UKR5 140 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 ARFGEF3Q5TH69 2177 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 IGHV7-81A0A0B4J1V7 117 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 C16orf95Q9H693 158 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 MAP6D1Q9H9H5 199 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 MSRB1Q9NZV6 116 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 CTSZQ9UBR2 303 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 DOCK5Q9H7D0 1870 aa3.5□□□□□ -1.85
LRRK2-204ENST00000430804 ZNF646O15015 1829 aaPredicted RBP3.5□□□□□ -1.85
LRRK2-204ENST00000430804 RALGAPA2Q2PPJ7 1873 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.49□□□□□ -1.85
LRRK2-204ENST00000430804 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SPATA12Q7Z6I5 190 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SLC25A29Q8N8R3 303 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 NDUFA4L2Q9NRX3 87 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SIP14410 1827 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 TTC28Q96AY4 2481 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGLV10-54A0A075B6I4 117 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 RBAKDNA6NC62 111 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 G3V4G9 280 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 DIAPH2-AS1Q14236 149 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGFBPL1Q8WX77 278 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 GFI1Q99684 422 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SIGMAR1Q99720 223 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 CYTL1Q9NRR1 136 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SPANXA1Q9NS26 97 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SNRNP200O75643 2136 aaKnown RBP3.49□□□□□ -1.85
LRRK2-204ENST00000430804 MYH15Q9Y2K3 1946 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGKCP01834 107 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 FRMD6-AS1P0C7T7 363 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGHV4-30-4P0DP06 118 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 GZMMP51124 257 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 C17orf58Q2M2W7 97 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 XAF1Q6GPH4 301 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 GTSF1LQ9H1H1 148 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 PCNX2A6NKB5 2137 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 PTPN13Q12923 2485 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 TRAV8-4A0A0B4J246 113 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 LINC00614P0C842 121 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 FOXA3P55318 350 aaPredicted RBP3.49□□□□□ -1.85
LRRK2-204ENST00000430804 DEFB114Q30KQ6 69 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 ZC2HC1BQ5TFG8 222 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGFL4Q6B9Z1 124 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 FNDC4Q9H6D8 234 aaPredicted RBP3.49□□□□□ -1.85
LRRK2-204ENST00000430804 PROK2Q9HC23 129 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 VIRMAQ69YN4 1812 aaKnown RBP3.49□□□□□ -1.85
LRRK2-204ENST00000430804 CCDC168Q8NDH2 2452 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 PLCE1Q9P212 2302 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 IGKV1-12A0A0C4DH73 117 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 TRBV10-1A0A0K0K1A3 114 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 H3BRN7 92 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 SLC17A3O00476 420 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 MIAQ16674 131 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 FAM19A1Q7Z5A9 133 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 Q8N9W7 124 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 LYPD6BQ8NI32 183 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 TMEM14CQ9P0S9 112 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 MGAMO43451 1857 aa3.49□□□□□ -1.85
LRRK2-204ENST00000430804 LOC107984640A0A0U1RRK4 108 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 RNF151Q2KHN1 245 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 KPRPQ5T749 579 aaPredicted RBP3.48□□□□□ -1.85
LRRK2-204ENST00000430804 ATRXP46100 2492 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 IGHV4-28A0A0C4DH34 117 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 Q6ZS49 121 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 HIGD2AQ9BW72 106 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 SSBP4Q9BWG4 385 aaPredicted RBP3.48□□□□□ -1.85
LRRK2-204ENST00000430804 IGKV1-27A0A075B6S5 117 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 SCO2A0A1W2PP80 73 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 SOCS3O14543 225 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 OTX1P32242 354 aaPredicted RBP3.48□□□□□ -1.85
LRRK2-204ENST00000430804 CCDC88CQ9P219 2028 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 TRBV20-1A0A075B6N2 111 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 PUSL1Q8N0Z8 303 aaKnown RBP3.48□□□□□ -1.85
LRRK2-204ENST00000430804 RNF126Q9BV68 326 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 ABCA1O95477 2261 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 IGKV1-9A0A0C4DH69 117 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 GAGE12HA6NDE8 117 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 SEM1Q6ZVN7 128 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 BOD1L2Q8IYS8 172 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 IFI27L1Q96BM0 104 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 DOCK7Q96N67 2140 aa3.48□□□□□ -1.85
LRRK2-204ENST00000430804 FAM24BQ8N5W8 94 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 TRBV19A0A075B6N1 114 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 A0A0U1RQV1 116 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 TRBV12-3P01733 135 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 MTURNQ8N3F0 131 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 SONP18583 2426 aaKnown RBP3.47□□□□□ -1.85
LRRK2-204ENST00000430804 K7ERS5 55 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 IGKV1-17P01599 117 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 CRYGBP07316 175 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 ESDP10768 282 aa3.47□□□□□ -1.85
LRRK2-204ENST00000430804 NANOS2P60321 138 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms