RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 ATP5LO75964 103 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 RPL24P83731 157 aaKnown RBP10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 UNQ9165/PRO28630Q6UXU0 137 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 LCNL1Q6ZST4 164 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 M0R381 172 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 OR5A1Q8NGJ0 315 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 MYOZ3Q8TDC0 251 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 METTL26Q96S19 204 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
TPM3P9-201ENST00000424846 C9orf47Q6ZRZ4 202 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 TM2D2Q9BX73 214 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 A0A087WX48 190 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 CENPVL3A0A0U1RRI6 287 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 AMTNQ6UX39 209 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 C16orf92Q96LL3 132 aa10.79□□□□□ -0.68
TPM3P9-201ENST00000424846 F6UB75 175 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 UBE2E1P51965 193 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 U3KQE9 123 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 IGKV3-7A0A075B6H7 116 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 WFDC2Q14508 124 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 GLMPQ8WWB7 406 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 IGLL5B9A064 214 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 C14orf178Q8N769 122 aaPredicted RBP10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 RASL10AQ92737 203 aa10.78□□□□□ -0.68
TPM3P9-201ENST00000424846 MUC4Q99102 2169 aa10.77□□□□□ -0.68
TPM3P9-201ENST00000424846 SMIM2Q9BVW6 85 aa10.77□□□□□ -0.69
TPM3P9-201ENST00000424846 BPESC1Q9GZL8 116 aa10.77□□□□□ -0.69
TPM3P9-201ENST00000424846 SMPXQ9UHP9 88 aa10.77□□□□□ -0.69
TPM3P9-201ENST00000424846 RAB9AP51151 201 aa10.77□□□□□ -0.69
TPM3P9-201ENST00000424846 ZFAND2AQ8N6M9 145 aa10.77□□□□□ -0.69
TPM3P9-201ENST00000424846 C5orf56Q8N8D9 126 aa10.77□□□□□ -0.69
TPM3P9-201ENST00000424846 SPG11Q96JI7 2443 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 PRSS47A8MTI9 375 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 RNF223E7ERA6 249 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 H3BMG7 143 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 CSMD2Q7Z408 3487 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 IGHV4-4A0A075B6R2 117 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 E9PLD3 99 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 NBL1P41271 181 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 LMO4P61968 165 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 KLK9Q2XQG4 91 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 C12orf74Q32Q52 190 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 ITLN2Q8WWU7 325 aaPredicted RBP10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 UBTD1Q9HAC8 227 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
TPM3P9-201ENST00000424846 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
TPM3P9-201ENST00000424846 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.75□□□□□ -0.69
TPM3P9-201ENST00000424846 GNRH2O43555 120 aa10.75□□□□□ -0.69
TPM3P9-201ENST00000424846 BRD3OSQ6XYD6 125 aa10.75□□□□□ -0.69
TPM3P9-201ENST00000424846 HIST1H4GQ99525 98 aa10.75□□□□□ -0.69
TPM3P9-201ENST00000424846 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 ITPR1Q14643 2758 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 RAXQ9Y2V3 346 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 TRBV7-3A0A075B6L6 115 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 TRBV7-1A0A0A6YYK4 115 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 NPFFO15130 113 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 IGHV3-11P01762 117 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 EDN2P20800 178 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 F8VRH5 84 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 MGPP08493 103 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 SUMO2P61956 95 aaKnown RBP10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 WFDC12Q8WWY7 111 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 HIF1ANQ9NWT6 349 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 CYSLTR1Q9Y271 337 aa10.74□□□□□ -0.69
TPM3P9-201ENST00000424846 MRPL53Q96EL3 112 aaKnown RBP10.73□□□□□ -0.69
TPM3P9-201ENST00000424846 CHTOPQ9Y3Y2 248 aaKnown RBP10.73□□□□□ -0.69
TPM3P9-201ENST00000424846 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.73□□□□□ -0.695e-7■□□□□ 11
TPM3P9-201ENST00000424846 TRAV41A0A0B4J266 112 aa10.73□□□□□ -0.69
TPM3P9-201ENST00000424846 SRD5A1P18405 259 aa10.73□□□□□ -0.69
TPM3P9-201ENST00000424846 EMP1P54849 157 aa10.73□□□□□ -0.69
TPM3P9-201ENST00000424846 FOXI2Q6ZQN5 318 aa10.73□□□□□ -0.69
TPM3P9-201ENST00000424846 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 H7C1H1 209 aa10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 RNASE4P34096 147 aaKnown RBP10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 ARL3P36405 182 aa10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 S100A4P26447 101 aaKnown RBP10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 JPT2Q9H910 190 aa10.72□□□□□ -0.69
TPM3P9-201ENST00000424846 HLA-DRB4P13762 266 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 PLNP26678 52 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 INSL3P51460 131 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 ETDBQ3ZM63 59 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 BAALCQ8WXS3 180 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 TOMM6Q96B49 74 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 PLEKHB2Q96CS7 222 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 HLA-DRB4X5D2U9 266 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 SOCS3O14543 225 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 RPL11P62913 178 aaKnown RBP10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 C19orf54Q5BKX5 351 aa10.71□□□□□ -0.69
TPM3P9-201ENST00000424846 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms