RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 CFAP161Q6P656 301 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 SHISA2Q6UWI4 295 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 TMEM213A2RRL7 107 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 RPL13AP40429 203 aaKnown RBP5.88□□□□□ -1.47
SCN7A-203ENST00000424326 CD300EQ496F6 205 aaPredicted RBP5.88□□□□□ -1.47
SCN7A-203ENST00000424326 TEX43Q6ZNM6 134 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 DNAJC30Q96LL9 226 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 ZMAT4Q9H898 229 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 ZFAND3Q9H8U3 227 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 A0A087WWL8 130 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 A0A087WX48 190 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 MRPL51Q4U2R6 128 aaKnown RBP5.88□□□□□ -1.47
SCN7A-203ENST00000424326 UNQ9165/PRO28630Q6UXU0 137 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 TRAV12-2A0A075B6T6 113 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 INAFM1C9JVW0 142 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 DDTP30046 118 aa5.88□□□□□ -1.47
SCN7A-203ENST00000424326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCN7A-203ENST00000424326 TRAV8-6A0A0B4J262 113 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 A0A0J9YX75 114 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 SH2D6Q7Z4S9 175 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 CACNA1AO00555 2505 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 KRTAP10-9P60411 292 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 C18orf32Q8TCD1 76 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 DLX4Q92988 240 aaPredicted RBP5.87□□□□□ -1.47
SCN7A-203ENST00000424326 TRBV12-3P01733 135 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 ZNF503Q96F45 646 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 LOC105371267A0A1B0GV96 52 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 DEFB130BP0DP73 79 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 DEFB130AP0DP74 79 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 HLA-DRB4P13762 266 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 MALP21145 153 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 KLF5Q13887 457 aaPredicted RBP5.87□□□□□ -1.47
SCN7A-203ENST00000424326 HLA-DRB4X5D2U9 266 aa5.87□□□□□ -1.47
SCN7A-203ENST00000424326 DOCK11Q5JSL3 2073 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 IGHV3-73A0A0B4J1V6 119 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 IGKV3OR2-268A0A0C4DH90 116 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 F6UB75 175 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 RHOHQ15669 191 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 TRBV25-1A0A075B6N4 114 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 K7EQG2 157 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 PRB4P10163 310 aaPredicted RBP5.86□□□□□ -1.47
SCN7A-203ENST00000424326 C16orf95Q9H693 158 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 TLN1Q9Y490 2541 aaKnown RBP5.86□□□□□ -1.47
SCN7A-203ENST00000424326 HIST2H2BCQ6DN03 193 aa5.86□□□□□ -1.47
SCN7A-203ENST00000424326 IGHV3-53P01767 116 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 DEFB114Q30KQ6 69 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 TMEM61Q8N0U2 210 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 RASL10AQ92737 203 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 SMIM2Q9BVW6 85 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 UTRNP46939 3433 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 CTRLP40313 264 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 LINC01006Q8NI28 216 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 SDHAF1A6NFY7 115 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 SYS1-DBNDD2H3BUS1 97 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 GAGE7O76087 117 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 AVPP01185 164 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 MAP6D1Q9H9H5 199 aa5.85□□□□□ -1.47
SCN7A-203ENST00000424326 C19orf71A6NCJ1 209 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 APRG1Q8IVJ8 170 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 UBE2DNLQ8IWF7 75 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 SS18Q15532 418 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 F5H768 121 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 U3KQE9 123 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 PRAC2D3DTV9 90 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 SMKR1H3BMG3 65 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 GNRH2O43555 120 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 TMEM243Q9BU79 118 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 GSN-AS1Q9NRJ2 163 aa5.84□□□□□ -1.47
SCN7A-203ENST00000424326 SMIM9A6NGZ8 99 aa5.84□□□□□ -1.48
SCN7A-203ENST00000424326 APOMO95445 188 aa5.84□□□□□ -1.48
SCN7A-203ENST00000424326 LINC00469Q8N7U9 141 aa5.84□□□□□ -1.48
SCN7A-203ENST00000424326 C2orf66Q6UXQ4 117 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 PRR14LQ5THK1 2151 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 CRLF1O75462 422 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 GFI1BQ5VTD9 330 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 SMIM13P0DJ93 91 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 FABP2P12104 132 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 HIVEP2P31629 2446 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 DNAH12Q6ZR08 3092 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 C3orf79P0CE67 100 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 ZNF25P17030 456 aaPredicted RBP5.83□□□□□ -1.48
SCN7A-203ENST00000424326 SMAD5-AS1Q9Y6J3 95 aa5.83□□□□□ -1.48
SCN7A-203ENST00000424326 GAGE12JA6NER3 117 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 GAGE1Q13065 139 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 GAGE4Q13068 117 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 GAGE5Q13069 117 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 PMVKQ15126 192 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 GAGE13Q4V321 117 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 SIGLEC8Q9NYZ4 499 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 IGHV1-24A0A0C4DH33 117 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 ZNRF2Q8NHG8 242 aa5.82□□□□□ -1.48
SCN7A-203ENST00000424326 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
SCN7A-203ENST00000424326 NDUFAF3Q9BU61 184 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms