RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 PSG8Q9UQ74 426 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 KLF12Q9Y4X4 402 aa7.7□□□□□ -1.18
USP49-204ENST00000423567 SPINK4O60575 86 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 RNF212Q495C1 297 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 SMUG1Q53HV7 270 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 SAPCD1Q5SSQ6 148 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 EIF5AL1Q6IS14 154 aaKnown RBP7.69□□□□□ -1.18
USP49-204ENST00000423567 DPPA3Q6W0C5 159 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 TCTE3Q8IZS6 198 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 FAM213BQ8TBF2 198 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 SFT2D1Q8WV19 159 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 HIST1H2BAQ96A08 127 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 C18orf15Q96N68 181 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 SPXQ9BT56 116 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 SDF2L1Q9HCN8 221 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 HYDINQ4G0P3 5121 aa7.69□□□□□ -1.18
USP49-204ENST00000423567 TRAV26-1A0A087WT03 109 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 FAM74A7A6NL05 159 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 PEX7O00628 323 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 GCGP01275 180 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 FHITP49789 147 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 CCL18P55774 89 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 TDRG1Q3Y452 100 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 CST9LP1Q5W188 147 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 TVP23CQ96ET8 276 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 TCEAL7Q9BRU2 100 aa7.68□□□□□ -1.18
USP49-204ENST00000423567 MRPL16Q9NX20 251 aaKnown RBP7.68□□□□□ -1.18
USP49-204ENST00000423567 A0A0J9YY99 117 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 IGLV2-11P01706 119 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 PFN1P07737 140 aaKnown RBP7.67□□□□□ -1.18
USP49-204ENST00000423567 HOXA5P20719 270 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 FAM3BP58499 235 aaPredicted RBP7.67□□□□□ -1.18
USP49-204ENST00000423567 UBE2G1P62253 170 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 AKAP14Q86UN6 197 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 C8orf49Q96NF6 230 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 MDFICQ9P1T7 246 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 ARL2-SNX15V9GYD0 113 aa7.67□□□□□ -1.18
USP49-204ENST00000423567 hCG_2014768A0A024R1R8 64 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 TRAV34A0A0B4J273 112 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 A0A1B0GV50 99 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 H3BNG1 76 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 C1QBP02746 253 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 RAB5CP51148 216 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 SLAQ13239 276 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 LGALSLQ3ZCW2 172 aaPredicted RBP7.66□□□□□ -1.18
USP49-204ENST00000423567 MBD3L1Q8WWY6 194 aa7.66□□□□□ -1.18
USP49-204ENST00000423567 IGHV3-16A0A0C4DH30 117 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 TEX46H3BTG2 121 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 M0R2P5 195 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 GNRH2O43555 120 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 IGHV3-53P01767 116 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 TYMSP04818 313 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 AKR1C3P42330 323 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 CDPF1Q6NVV7 123 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 Q86TA4 180 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 RASL10AQ92737 203 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 FMC1Q96HJ9 113 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 LINC00479Q96M42 142 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 ZFP30Q9Y2G7 519 aa7.65□□□□□ -1.18
USP49-204ENST00000423567 TRGV4A0A0C4DH28 118 aa7.64□□□□□ -1.19
USP49-204ENST00000423567 M0R2N4 97 aa7.64□□□□□ -1.19
USP49-204ENST00000423567 PAGE4O60829 102 aa7.64□□□□□ -1.19
USP49-204ENST00000423567 ZNF80P51504 273 aaPredicted RBP7.64□□□□□ -1.19
USP49-204ENST00000423567 SLC51BQ86UW2 128 aa7.64□□□□□ -1.19
USP49-204ENST00000423567 PRO0255Q9UI72 69 aa7.64□□□□□ -1.19
USP49-204ENST00000423567 VPS13DQ5THJ4 4388 aa7.64□□□□□ -1.19
USP49-204ENST00000423567 IGLV2-18A0A075B6J9 118 aa7.63□□□□□ -1.19
USP49-204ENST00000423567 FABP5P3A8MUU1 101 aa7.63□□□□□ -1.19
USP49-204ENST00000423567 PAX4O43316 350 aa7.63□□□□□ -1.19
USP49-204ENST00000423567 S100A9P06702 114 aaKnown RBP7.63□□□□□ -1.19
USP49-204ENST00000423567 OR4C5Q8NGB2 326 aa7.63□□□□□ -1.19
USP49-204ENST00000423567 HHLA3Q9XRX5 114 aa7.63□□□□□ -1.19
USP49-204ENST00000423567 TRAV4A0A0B4J268 109 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 C9JCJ5 164 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 S100A4P26447 101 aaKnown RBP7.62□□□□□ -1.19
USP49-204ENST00000423567 PCNPQ8WW12 178 aaKnown RBP7.62□□□□□ -1.19
USP49-204ENST00000423567 VSIG2Q96IQ7 327 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 MANBALQ9NQG1 85 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 C11orf21Q9P2W6 132 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 LINC00588Q9Y4M8 146 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 ICOSQ9Y6W8 199 aa7.62□□□□□ -1.19
USP49-204ENST00000423567 TRAV1-1A0A0B4J248 108 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 TRBV6-1A0A0K0K1D8 114 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 LTAP01374 205 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 ORM1P02763 201 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 SFTA3P0C7M3 94 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 ASIPP42127 132 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 SULT1A2P50226 295 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 FHL2Q14192 279 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 SOHLH1Q5JUK2 328 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 FAM162BQ5T6X4 162 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 ZNF479Q96JC4 524 aa7.61□□□□□ -1.19
USP49-204ENST00000423567 A0A096LPF7 62 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 B4DEV8 164 aa7.6□□□□□ -1.19
USP49-204ENST00000423567 IFNA1P01562 189 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms