RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 NPCDR1Q9BY65 106 aa4.81□□□□□ -1.64
RFX3-205ENST00000420720 OR51M1Q9H341 326 aa4.81□□□□□ -1.64
RFX3-205ENST00000420720 DNAH8Q96JB1 4490 aa4.81□□□□□ -1.64
RFX3-205ENST00000420720 GYPEP15421 78 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 EVI2AP22794 236 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 GCSHP23434 173 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 TMEM183BQ1AE95 376 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 TMEM183AQ8IXX5 376 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 THAP6Q8TBB0 222 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 PCNPQ8WW12 178 aaKnown RBP4.8□□□□□ -1.64
RFX3-205ENST00000420720 FXYD5Q96DB9 178 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 PHYHIPLQ96FC7 376 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 PAXXQ9BUH6 204 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 NUDT15Q9NV35 164 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 MSRB1Q9NZV6 116 aa4.8□□□□□ -1.64
RFX3-205ENST00000420720 LOC100131303A0A0U1RQF7 123 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 SIX6O95475 246 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 CSN1S1P47710 185 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 RANP62826 216 aaKnown RBP4.79□□□□□ -1.64
RFX3-205ENST00000420720 ZNF266Q14584 549 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 FAM159AQ6UWV7 190 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 IQCF2Q8IXL9 164 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 OR10G4Q8NGN3 311 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 OR5C1Q8NGR4 320 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 SPXQ9BT56 116 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 SLC25A31Q9H0C2 315 aa4.79□□□□□ -1.64
RFX3-205ENST00000420720 TRGV11A0A075B6L2 103 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 IGLV5-52A0A0A0MRZ9 124 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 IGHV3-16A0A0C4DH30 117 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 GNRH2O43555 120 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 PSCAO43653 123 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 OR7C2O60412 319 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 EIF3GO75821 320 aaKnown RBP eCLIP4.78□□□□□ -1.64
RFX3-205ENST00000420720 ORM1P02763 201 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 CRYGDP07320 174 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 Q6AWC8 147 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 OR4C5Q8NGB2 326 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 RASL10AQ92737 203 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 TXNDC17Q9BRA2 123 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 WDR61Q9GZS3 305 aaKnown RBP4.78□□□□□ -1.64
RFX3-205ENST00000420720 OR5AC2Q9NZP5 309 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 NAGKQ9UJ70 344 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 RPH3ALQ9UNE2 315 aa4.78□□□□□ -1.64
RFX3-205ENST00000420720 TRAV4A0A0B4J268 109 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 FAM240BA0A1B0GVZ2 78 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 RBAKDNA6NC62 111 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 LRCOL1A6NCL2 159 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 C9JCJ5 164 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 C17orf112F2Z3M2 114 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 H0YIZ8 118 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 K7EP13 123 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 UBE2L3P68036 154 aaKnown RBP4.77□□□□□ -1.65
RFX3-205ENST00000420720 LRRC37A5PQ49AS3 106 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 C10orf126Q8N4M7 172 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 NHLRC2Q8NBF2 726 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 HYLS1Q96M11 299 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 Q9HAA7 133 aa4.77□□□□□ -1.65
RFX3-205ENST00000420720 IGHV3-38A0A0C4DH36 116 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 PGPA6NDG6 321 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 F6UZH7 168 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 M0R2P5 195 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 IGHV3-30P01768 117 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 IGHV3-33P01772 117 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 IGHV3-30-3P0DP02 117 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 IGHV3-30-5P0DP03 117 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 PPT1P50897 306 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 FFAR4Q5NUL3 377 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 Q6ZSN1 163 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 KCNIP2Q9NS61 270 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 LENEPQ9Y5L5 61 aa4.76□□□□□ -1.65
RFX3-205ENST00000420720 TRAV21A0A0B4J279 112 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 TYMSP04818 313 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 GATA1P15976 413 aaPredicted RBP4.75□□□□□ -1.65
RFX3-205ENST00000420720 TDRG1Q3Y452 100 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 OR10J3Q5JRS4 329 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 MZT2BQ6NZ67 158 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 GOLT1AQ6ZVE7 132 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 Q8N814 137 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 CMTM2Q8TAZ6 248 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 NTN5Q8WTR8 489 aaPredicted RBP4.75□□□□□ -1.65
RFX3-205ENST00000420720 TVP23CQ96ET8 276 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 ATP5SQ99766 215 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 TMEM70Q9BUB7 260 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 CCDC32Q9BV29 185 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 NMES1Q9C002 83 aa4.75□□□□□ -1.65
RFX3-205ENST00000420720 TRAV8-1A0A0A6YYK1 113 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 IGHV3-73A0A0B4J1V6 119 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 TRAV8-6A0A0B4J262 113 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 FBLL1A6NHQ2 334 aaKnown RBP4.74□□□□□ -1.65
RFX3-205ENST00000420720 PFN1P07737 140 aaKnown RBP4.74□□□□□ -1.65
RFX3-205ENST00000420720 TIRAPP58753 221 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 TAS2R45P59539 299 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 KHDC3LQ587J8 217 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 LINC01556Q5JQF7 62 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 FAM74A1Q5RGS3 127 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 DPPA3Q6W0C5 159 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms