RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 KCNS1Q96KK3 526 aa14.35□□□□□ -0.11
RAB3IP-205ENST00000417413 RNF114Q9Y508 228 aa14.35□□□□□ -0.11
RAB3IP-205ENST00000417413 TSSC4Q9Y5U2 329 aaPredicted RBP14.35□□□□□ -0.11
RAB3IP-205ENST00000417413 TRAV2A0A0B4J234 112 aa14.34□□□□□ -0.11
RAB3IP-205ENST00000417413 CD33P20138 364 aa14.34□□□□□ -0.11
RAB3IP-205ENST00000417413 RNASE4P34096 147 aaKnown RBP14.34□□□□□ -0.11
RAB3IP-205ENST00000417413 TWIST1Q15672 202 aa14.34□□□□□ -0.11
RAB3IP-205ENST00000417413 ODF3Q96PU9 254 aa14.34□□□□□ -0.11
RAB3IP-205ENST00000417413 NIT2Q9NQR4 276 aa14.34□□□□□ -0.11
RAB3IP-205ENST00000417413 CCL24O00175 119 aa14.33□□□□□ -0.11
RAB3IP-205ENST00000417413 JOSD1Q15040 202 aaPredicted RBP14.33□□□□□ -0.11
RAB3IP-205ENST00000417413 FAM104BQ5XKR9 115 aa14.33□□□□□ -0.11
RAB3IP-205ENST00000417413 CDPF1Q6NVV7 123 aa14.33□□□□□ -0.11
RAB3IP-205ENST00000417413 MSRB1Q9NZV6 116 aa14.33□□□□□ -0.11
RAB3IP-205ENST00000417413 NSD1Q96L73 2696 aaPredicted RBP14.33□□□□□ -0.11
RAB3IP-205ENST00000417413 PROK1P58294 105 aa14.33□□□□□ -0.12
RAB3IP-205ENST00000417413 DEFB114Q30KQ6 69 aa14.33□□□□□ -0.12
RAB3IP-205ENST00000417413 TMEM61Q8N0U2 210 aa14.33□□□□□ -0.12
RAB3IP-205ENST00000417413 URB1-AS1Q96HZ7 61 aa14.33□□□□□ -0.12
RAB3IP-205ENST00000417413 FN1P02751 2386 aaKnown RBP14.33□□□□□ -0.12
RAB3IP-205ENST00000417413 SNAI2O43623 268 aa14.32□□□□□ -0.12
RAB3IP-205ENST00000417413 OR5AL1P0C617 328 aa14.32□□□□□ -0.12
RAB3IP-205ENST00000417413 DNLZQ5SXM8 178 aa14.32□□□□□ -0.12
RAB3IP-205ENST00000417413 ANXA2RQ3ZCQ2 193 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 DMRTA1Q5VZB9 504 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 EBLN2Q6P2I7 272 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 FOXI2Q6ZQN5 318 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 AMN1Q8IY45 258 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 SAMD10Q9BYL1 202 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 TMEM191AQ9H0A3 160 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 U3KQK5 164 aa14.31□□□□□ -0.12
RAB3IP-205ENST00000417413 IGHV4-4A0A075B6R2 117 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 ZNF324O75467 553 aaPredicted RBP14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 LEPP41159 167 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 NIT1Q86X76 327 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 OR10AG1Q8NH19 301 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 DYNLRB2Q8TF09 96 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 NAGKQ9UJ70 344 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 CUBNO60494 3623 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 DUSP14O95147 198 aaKnown RBP14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 MRPL51Q4U2R6 128 aaKnown RBP14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 Q6ZWC4 215 aa14.3□□□□□ -0.12
RAB3IP-205ENST00000417413 ADARB2-AS1A8MUL3 147 aa14.29□□□□□ -0.12
RAB3IP-205ENST00000417413 AGRNO00468 2067 aa14.29□□□□□ -0.12
RAB3IP-205ENST00000417413 H3BVH4 76 aa14.28□□□□□ -0.12
RAB3IP-205ENST00000417413 PMCHP20382 165 aa14.28□□□□□ -0.12
RAB3IP-205ENST00000417413 AMTP48728 403 aa14.28□□□□□ -0.12
RAB3IP-205ENST00000417413 CD300EQ496F6 205 aaPredicted RBP14.28□□□□□ -0.12
RAB3IP-205ENST00000417413 AMTNQ6UX39 209 aa14.28□□□□□ -0.12
RAB3IP-205ENST00000417413 RNF185Q96GF1 192 aa14.28□□□□□ -0.12
RAB3IP-205ENST00000417413 C7orf71A4D174 169 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 A8MTW9 85 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 IGKV3-20P01619 116 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 DEFB131AP59861 70 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 CACNG7P62955 275 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 RNASEKQ6P5S7 137 aaKnown RBP14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 FAM19A2Q8N3H0 131 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 SIGLEC8Q9NYZ4 499 aa14.27□□□□□ -0.12
RAB3IP-205ENST00000417413 D6R8Y8 96 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 GNRH2O43555 120 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 MED14OSP0DP75 135 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 RAB4AP20338 218 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 ASIPP42127 132 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 NF1P21359 2839 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 TRAV25A0A0B4J276 109 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 PCP4L1A6NKN8 68 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 HSBP1O75506 76 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 CHCHD1Q96BP2 118 aaKnown RBP14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 SCRT2Q9NQ03 307 aa14.26□□□□□ -0.13
RAB3IP-205ENST00000417413 TRAV12-3A0A0B4J271 114 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 KNCNA6PVL3 124 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 M0R2Z0 102 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 LINC00614P0C842 121 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 KRTAP10-3P60369 221 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 ORMDL3Q8N138 153 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 PRELID3AQ96N28 172 aa14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 SPAG8Q99932 426 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 ZNF256Q9Y2P7 627 aaPredicted RBP14.25□□□□□ -0.13
RAB3IP-205ENST00000417413 HLA-DRB4P13762 266 aa14.24□□□□□ -0.13
RAB3IP-205ENST00000417413 TSPOP30536 169 aa14.24□□□□□ -0.13
RAB3IP-205ENST00000417413 CDKN1BP46527 198 aa14.24□□□□□ -0.13
RAB3IP-205ENST00000417413 MAP6D1Q9H9H5 199 aa14.24□□□□□ -0.13
RAB3IP-205ENST00000417413 HLA-DRB4X5D2U9 266 aa14.24□□□□□ -0.13
RAB3IP-205ENST00000417413 SORL1Q92673 2214 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 RNASE3P12724 160 aaKnown RBP14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 SPINK13Q1W4C9 94 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 SPANXN1Q5VSR9 72 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 GSN-AS1Q9NRJ2 163 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 TRAV12-2A0A075B6T6 113 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 OR4C46A6NHA9 309 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 H3BMM0 161 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 EVI2AP22794 236 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 S100A4P26447 101 aaKnown RBP14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 CKS2P33552 79 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 TDRG1Q3Y452 100 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 FAM159AQ6UWV7 190 aa14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 TIMM8BQ9Y5J9 83 aaPredicted RBP14.23□□□□□ -0.13
RAB3IP-205ENST00000417413 SMKR1H3BMG3 65 aa14.22□□□□□ -0.13
RAB3IP-205ENST00000417413 ZNF124Q15973 351 aa14.22□□□□□ -0.13
RAB3IP-205ENST00000417413 SPRY2O43597 315 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms