RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 CCL21O00585 134 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 TM2D2Q9BX73 214 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 CNFNQ9BYD5 112 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 MGPP08493 103 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 C8orf86Q6ZUL3 223 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 HIGD1BQ9P298 99 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 GAGE12HA6NDE8 117 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 PRTN3P24158 256 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 TMEM78Q5T7P6 136 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 ZNF502Q8TBZ5 544 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 PTH2Q96A98 100 aa11.14□□□□□ -0.63
SEMA3F-202ENST00000413852 A0A087WX48 190 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 HLA-DRB4P13762 266 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 Q5PR19 223 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 VKORC1Q9BQB6 163 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 HLA-DRB4X5D2U9 266 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 ATP5LO75964 103 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 TRBV12-3P01733 135 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 SRD5A1P18405 259 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
SEMA3F-202ENST00000413852 CCDC144NLQ6NUI1 221 aa11.12□□□□□ -0.63
SEMA3F-202ENST00000413852 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
SEMA3F-202ENST00000413852 ZFP2Q6ZN57 461 aa11.12□□□□□ -0.63
SEMA3F-202ENST00000413852 Q8N6K4 173 aa11.12□□□□□ -0.63
SEMA3F-202ENST00000413852 SIGMAR1Q99720 223 aa11.12□□□□□ -0.63
SEMA3F-202ENST00000413852 GNRH2O43555 120 aa11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 CD300EQ496F6 205 aaPredicted RBP11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 C16orf92Q96LL3 132 aa11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 JPT2Q9H910 190 aa11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 CHTOPQ9Y3Y2 248 aaKnown RBP11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 A0A1B0GWB2 263 aa11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 RASL10AQ92737 203 aa11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 PGPEP1Q9NXJ5 209 aa11.11□□□□□ -0.63
SEMA3F-202ENST00000413852 SPG11Q96JI7 2443 aa11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 TRBV7-3A0A075B6L6 115 aa11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 RPL11P62913 178 aaKnown RBP11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 SRSF1Q07955 248 aaKnown RBP eCLIP11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 ZNF418Q8TF45 676 aaPredicted RBP11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 A0A1W2PPR1 153 aa11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 APOMO95445 188 aa11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 LGALS1P09382 135 aaKnown RBP11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 GAGE13Q4V321 117 aa11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 ZNF48Q96MX3 618 aaPredicted RBP11.1□□□□□ -0.63
SEMA3F-202ENST00000413852 SORL1Q92673 2214 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 RRN3P1Q2M238 152 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 PIFOQ8TCI5 191 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 SLC25A16P16260 332 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 EDN2P20800 178 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 ARL3P36405 182 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 TIMD4Q96H15 378 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 PRADC1Q9BSG0 188 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 SMIM2Q9BVW6 85 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 PRO0461Q9UI25 63 aa11.09□□□□□ -0.63
SEMA3F-202ENST00000413852 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
SEMA3F-202ENST00000413852 S100A4P26447 101 aaKnown RBP11.08□□□□□ -0.64
SEMA3F-202ENST00000413852 IGF2-ASQ6U949 168 aa11.08□□□□□ -0.64
SEMA3F-202ENST00000413852 RNASE4P34096 147 aaKnown RBP11.08□□□□□ -0.64
SEMA3F-202ENST00000413852 CHD8Q9HCK8 2581 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 F8VRH5 84 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 H7C1H1 209 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 DUSP14O95147 198 aaKnown RBP11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 SAA4P35542 130 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 PSMB2P49721 201 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 SMCPP49901 116 aaPredicted RBP11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 MRPL16Q9NX20 251 aaKnown RBP11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 RAXQ9Y2V3 346 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 ZNF815PA8K554 130 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 ANXA2RQ3ZCQ2 193 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 SCGB1D4Q6XE38 83 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 BAALCQ8WXS3 180 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 AJUBAQ96IF1 538 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 CLUHP3Q96NS8 147 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 NCOR2Q9Y618 2525 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 RPL39P62891 51 aaKnown RBP11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 C2orf66Q6UXQ4 117 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
SEMA3F-202ENST00000413852 SUMO2P61956 95 aaKnown RBP11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 FOXC1Q12948 553 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 NFE4Q86UQ8 179 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 METTL26Q96S19 204 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 RNF223E7ERA6 249 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 F8W1H4 67 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 M0R1W7 72 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 FHL3Q13643 280 aa11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 FAM110DQ8TAY7 271 aaPredicted RBP11.06□□□□□ -0.64
SEMA3F-202ENST00000413852 HOXA3O43365 443 aaPredicted RBP11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
SEMA3F-202ENST00000413852 Q6ZS46 218 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms