RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 Q6AWC8 147 aa10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 ZNF705AQ6ZN79 300 aaPredicted RBP10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 SMIM12Q96EX1 92 aa10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
CHRNA1-204ENST00000409323 TMSB15BA0A087X1C1 80 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 EMP1P54849 157 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 RPL19P84098 196 aaKnown RBP10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 ANXA2RQ3ZCQ2 193 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 TMEM88Q6PEY1 159 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 CBLN2Q8IUK8 224 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 ISOC2Q96AB3 205 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 ANAPC16Q96DE5 110 aa10.19□□□□□ -0.78
CHRNA1-204ENST00000409323 TRAV21A0A0B4J279 112 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 COLCA2A8K830 154 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 GNRH2O43555 120 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 FAM162BQ5T6X4 162 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 ZMAT4Q9H898 229 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 IGHV4-28A0A0C4DH34 117 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 CBY3A6NI87 242 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 FABP5P3A8MUU1 101 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 H7BYZ3 331 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 ORM1P02763 201 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 MT-ND4LP03901 98 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 RNF212Q495C1 297 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 C15orf54Q8N8G6 183 aa10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 RNASE7Q9H1E1 156 aaKnown RBP10.18□□□□□ -0.78
CHRNA1-204ENST00000409323 IGHV1OR15-1A0A075B7D0 117 aa10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 ADIRFQ15847 76 aa10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 RRN3P1Q2M238 152 aa10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 FAM159AQ6UWV7 190 aa10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 TMEM256Q8N2U0 113 aa10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 TIMM8BQ9Y5J9 83 aaPredicted RBP10.17□□□□□ -0.78
CHRNA1-204ENST00000409323 GRIFINA4D1Z8 144 aa10.16□□□□□ -0.78
CHRNA1-204ENST00000409323 COX8CQ7Z4L0 72 aa10.16□□□□□ -0.78
CHRNA1-204ENST00000409323 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
CHRNA1-204ENST00000409323 C20orf144Q9BQM9 153 aa10.16□□□□□ -0.78
CHRNA1-204ENST00000409323 PYGO2Q9BRQ0 406 aa10.16□□□□□ -0.78
CHRNA1-204ENST00000409323 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
CHRNA1-204ENST00000409323 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
CHRNA1-204ENST00000409323 PPP1R2P9O14990 202 aa10.15□□□□□ -0.78
CHRNA1-204ENST00000409323 TYMSP04818 313 aa10.15□□□□□ -0.78
CHRNA1-204ENST00000409323 Q8NAQ8 132 aa10.15□□□□□ -0.78
CHRNA1-204ENST00000409323 MDFICQ9P1T7 246 aa10.15□□□□□ -0.78
CHRNA1-204ENST00000409323 COL7A1Q02388 2944 aa10.15□□□□□ -0.78
CHRNA1-204ENST00000409323 GZMBP10144 247 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 ELOBQ15370 118 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 NUDT10Q8NFP7 164 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 DAZAP1Q96EP5 407 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 NUDT11Q96G61 164 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 SFRP2Q96HF1 295 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 GSN-AS1Q9NRJ2 163 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 FAM231DQ6ZW35 169 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 RNASE8Q8TDE3 154 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 OSTCQ9NRP0 149 aa10.14□□□□□ -0.79
CHRNA1-204ENST00000409323 TRBV24-1A0A075B6N3 115 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 PLAC8L1A1L4L8 177 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 P01737 135 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 ERVFC1-1P60608 527 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 ZNF575Q86XF7 245 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 OR2D3Q8NGH3 330 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 DNAH9Q9NYC9 4486 aa10.13□□□□□ -0.79
CHRNA1-204ENST00000409323 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 MUC21A0A0G2JKD1 596 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 MUC21A0A140T8X8 626 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 TMEM189A5PLL7 270 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 MIFP14174 115 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 SSTP61278 116 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 IBA57Q5T440 356 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 C11orf72Q8NBR9 251 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 TMEM263Q8WUH6 116 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 NEU1Q99519 415 aa10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 NOP10Q9NPE3 64 aaKnown RBP10.12□□□□□ -0.79
CHRNA1-204ENST00000409323 IGHV3-16A0A0C4DH30 117 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 H3BVH4 76 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 NHLRC4P0CG21 123 aaPredicted RBP10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 TDRG1Q3Y452 100 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 OR10G8Q8NGN5 311 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 C16orf74Q96GX8 76 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 U3KQK5 164 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 V9GYV3 84 aa10.11□□□□□ -0.79
CHRNA1-204ENST00000409323 MUC4Q99102 2169 aa10.1□□□□□ -0.79
CHRNA1-204ENST00000409323 SMIM9A6NGZ8 99 aa10.1□□□□□ -0.79
CHRNA1-204ENST00000409323 KCNS1Q96KK3 526 aa10.1□□□□□ -0.79
CHRNA1-204ENST00000409323 TPPP3Q9BW30 176 aa10.1□□□□□ -0.79
CHRNA1-204ENST00000409323 BIN3Q9NQY0 253 aa10.1□□□□□ -0.79
CHRNA1-204ENST00000409323 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 GATCO43716 136 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 RNASE3P12724 160 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 S100A4P26447 101 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 ZNF415Q09FC8 603 aa10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 FAM222AQ5U5X8 452 aa10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 LINC00467Q9BRT7 94 aa10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 RPP21Q9H633 154 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 MRPL16Q9NX20 251 aaKnown RBP10.09□□□□□ -0.79
CHRNA1-204ENST00000409323 SNURFLB1AK76 121 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms