RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 NFE4Q86UQ8 179 aa8.73□□□□□ -1.01
CHRNA1-203ENST00000409219 VSIG2Q96IQ7 327 aa8.73□□□□□ -1.01
CHRNA1-203ENST00000409219 SLC35E1Q96K37 410 aa8.73□□□□□ -1.01
CHRNA1-203ENST00000409219 TXNDC17Q9BRA2 123 aa8.73□□□□□ -1.01
CHRNA1-203ENST00000409219 TMPRSS5Q9H3S3 457 aa8.73□□□□□ -1.01
CHRNA1-203ENST00000409219 HMGB3O15347 200 aaKnown RBP8.72□□□□□ -1.01
CHRNA1-203ENST00000409219 CXorf1O96002 111 aa8.72□□□□□ -1.01
CHRNA1-203ENST00000409219 MT-ND4LP03901 98 aa8.72□□□□□ -1.01
CHRNA1-203ENST00000409219 RHOBP62745 196 aa8.72□□□□□ -1.01
CHRNA1-203ENST00000409219 FLI1Q01543 452 aaPredicted RBP8.72□□□□□ -1.01
CHRNA1-203ENST00000409219 GAMTQ14353 236 aa8.72□□□□□ -1.01
CHRNA1-203ENST00000409219 IGKV1OR2-108A0A075B7D4 117 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 AKR1C3P42330 323 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 CYP2G1PQ6ZSU1 146 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 DEFB104AQ8WTQ1 72 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 HIST1H2BAQ96A08 127 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 YPEL4Q96NS1 127 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 SDF2L1Q9HCN8 221 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 ARL2-SNX15V9GYD0 113 aa8.71□□□□□ -1.01
CHRNA1-203ENST00000409219 EIF3GO75821 320 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 PLA2G1BP04054 148 aaKnown RBP8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 CEBPGP53567 150 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 TMEM242Q9NWH2 141 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 FAM30AQ9NZY2 134 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 IGLV5-52A0A0A0MRZ9 124 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 ZNF98A6NK75 572 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 ZNF727A8MUV8 499 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 F6UZH7 168 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 H7BYZ3 331 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 PDE6DO43924 150 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 PAGE4O60829 102 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 ARL14EPLP0DKL9 152 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 PRB4P10163 310 aaPredicted RBP8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 ZNF738Q8NE65 137 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 SMIM7Q9BQ49 75 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 NAT8Q9UHE5 227 aa8.7□□□□□ -1.02
CHRNA1-203ENST00000409219 FABP1P07148 127 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 OR5G3P0C626 314 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 GCHFRP30047 84 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 KIR3DS1Q14943 382 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 OR8A1Q8NGG7 326 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 TRGV9Q99603 122 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 CTDSP1Q9GZU7 261 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 FUT9Q9Y231 359 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 PRELID1Q9Y255 219 aa8.69□□□□□ -1.02
CHRNA1-203ENST00000409219 CDKN1BP46527 198 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 SELENOTP62341 195 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 TMEM241Q24JQ0 296 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 IQCF2Q8IXL9 164 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 OR1B1Q8NGR6 318 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 MRPL32Q9BYC8 188 aaKnown RBP8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 PARLQ9H300 379 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 PPP1R14DQ9NXH3 145 aa8.68□□□□□ -1.02
CHRNA1-203ENST00000409219 SNURFLB1AK76 121 aa8.67□□□□□ -1.02
CHRNA1-203ENST00000409219 RAB5AP20339 215 aa8.67□□□□□ -1.02
CHRNA1-203ENST00000409219 PQLC2Q6ZP29 291 aa8.67□□□□□ -1.02
CHRNA1-203ENST00000409219 Q6ZTI0 123 aa8.67□□□□□ -1.02
CHRNA1-203ENST00000409219 GPR82Q96P67 336 aa8.67□□□□□ -1.02
CHRNA1-203ENST00000409219 MSRB1Q9NZV6 116 aa8.67□□□□□ -1.02
CHRNA1-203ENST00000409219 NPIPB6E9PJ23 425 aa8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 TAS2R45P59539 299 aa8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 MIR17HGQ75NE6 70 aa8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 NTN5Q8WTR8 489 aaPredicted RBP8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 RPUSD4Q96CM3 377 aaKnown RBP8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 C20orf144Q9BQM9 153 aa8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 LINC00467Q9BRT7 94 aa8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
CHRNA1-203ENST00000409219 RAB5BP61020 215 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 RPL23P62829 140 aaKnown RBP8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 ELOBQ15370 118 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 CST9LP1Q5W188 147 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 OR1L4Q8NGR5 311 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 C11orf52Q96A22 123 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 PFDN5Q99471 154 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 DNAJC4Q9NNZ3 241 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 ICOSQ9Y6W8 199 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 LY96Q9Y6Y9 160 aa8.65□□□□□ -1.02
CHRNA1-203ENST00000409219 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 GATA2P23769 480 aaPredicted RBP8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 UBE2G2P60604 165 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 ZNF674Q2M3X9 581 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 GFI1BQ5VTD9 330 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 TMEM37Q8WXS4 190 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 H3BRN7 92 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 ORM2P19652 201 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 PLP1P60201 277 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 DAZ2Q13117 558 aaKnown RBP8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 PSG3Q16557 428 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 WFDC10BQ8IUB3 73 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 FAM167A-AS1Q96KT0 104 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 BIN3Q9NQY0 253 aa8.64□□□□□ -1.03
CHRNA1-203ENST00000409219 TRBV24-1A0A075B6N3 115 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms