RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 ODF3BA8MYP8 253 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 APOMO95445 188 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 MT-ATP8P03928 68 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 Q8N9W7 124 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 SS18L2Q9UHA2 77 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 PKD1L2Q7Z442 2459 aa11.62□□□□□ -0.55
ATG4B-206ENST00000405546 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
ATG4B-206ENST00000405546 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
ATG4B-206ENST00000405546 NOTCH3Q9UM47 2321 aa11.61□□□□□ -0.55
ATG4B-206ENST00000405546 SORL1Q92673 2214 aa11.61□□□□□ -0.55
ATG4B-206ENST00000405546 F8W735 103 aaPredicted RBP11.61□□□□□ -0.55
ATG4B-206ENST00000405546 H3BVH4 76 aa11.61□□□□□ -0.55
ATG4B-206ENST00000405546 SPINK8P0C7L1 97 aa11.61□□□□□ -0.55
ATG4B-206ENST00000405546 MAP1LC3AQ9H492 121 aa11.61□□□□□ -0.55
ATG4B-206ENST00000405546 C11orf71Q6IPW1 123 aa11.6□□□□□ -0.55
ATG4B-206ENST00000405546 PSMB2P49721 201 aa11.6□□□□□ -0.55
ATG4B-206ENST00000405546 PDE6HQ13956 83 aa11.6□□□□□ -0.55
ATG4B-206ENST00000405546 MINOS1Q5TGZ0 78 aa11.59□□□□□ -0.55
ATG4B-206ENST00000405546 MINOS1-NBL1R4GNA1 71 aa11.59□□□□□ -0.55
ATG4B-206ENST00000405546 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
ATG4B-206ENST00000405546 IGHV3-11P01762 117 aa11.59□□□□□ -0.55
ATG4B-206ENST00000405546 SIVA1O15304 175 aa11.59□□□□□ -0.55
ATG4B-206ENST00000405546 EMP1P54849 157 aa11.59□□□□□ -0.55
ATG4B-206ENST00000405546 SMAD5-AS1Q9Y6J3 95 aa11.59□□□□□ -0.55
ATG4B-206ENST00000405546 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
ATG4B-206ENST00000405546 E9PLD3 99 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 GNLYP22749 145 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 Q6ZQT7 251 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 IL17RELQ6ZVW7 336 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 PGPEP1Q9NXJ5 209 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 Q6AWC8 147 aa11.58□□□□□ -0.56
ATG4B-206ENST00000405546 DPM2O94777 84 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 ZFP2Q6ZN57 461 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
ATG4B-206ENST00000405546 F8W1H4 67 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 TRGV3P03979 118 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 UBE2E1P51965 193 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 RNF183Q96D59 192 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 METTL26Q96S19 204 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 HIF1ANQ9NWT6 349 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 TLN2Q9Y4G6 2542 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 TMEM78Q5T7P6 136 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 C16orf92Q96LL3 132 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 SIRPDQ9H106 197 aa11.57□□□□□ -0.56
ATG4B-206ENST00000405546 C19orf84I3L1E1 186 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 HLA-DRB4P13762 266 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 DPF1Q92782 380 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 HLA-DRB4X5D2U9 266 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 NPFFO15130 113 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 FHL3Q13643 280 aa11.56□□□□□ -0.56
ATG4B-206ENST00000405546 OOSP1A8MZH6 123 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 SVIPQ8NHG7 77 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 EEF1AKMT3Q96AZ1 226 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 FLNCQ14315 2725 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 NFE4Q86UQ8 179 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 KIR2DL4Q99706 377 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 A0A1B0GW15 77 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 LINC01549A6NIU2 74 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 C1orf122Q6ZSJ8 110 aa11.55□□□□□ -0.56
ATG4B-206ENST00000405546 CRYBG3Q68DQ2 2970 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 DEFB1P60022 68 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 PAX8Q06710 450 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 C8orf86Q6ZUL3 223 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 DTX2Q86UW9 622 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 FAM110DQ8TAY7 271 aaPredicted RBP11.54□□□□□ -0.56
ATG4B-206ENST00000405546 MRAP2Q96G30 205 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 BUB3O43684 328 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 XGP55808 180 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 ZNF502Q8TBZ5 544 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 RNF185Q96GF1 192 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 SPATA25Q9BR10 227 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 LRRK2Q5S007 2527 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 H7C2G1 150 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 PF4V1P10720 104 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 SPANXN1Q5VSR9 72 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 SCGB1D4Q6XE38 83 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 Q8N6K4 173 aa11.54□□□□□ -0.56
ATG4B-206ENST00000405546 CUBNO60494 3623 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 SRD5A1P18405 259 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 RRN3P1Q2M238 152 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 CENPVL3A0A0U1RRI6 287 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 AGPAT4-IT1Q9H0P7 198 aa11.53□□□□□ -0.56
ATG4B-206ENST00000405546 LMO4P61968 165 aa11.52□□□□□ -0.56
ATG4B-206ENST00000405546 SRSF9Q13242 221 aaKnown RBP eCLIP11.52□□□□□ -0.562e-8■■■□□ 15
ATG4B-206ENST00000405546 S100A4P26447 101 aaKnown RBP11.52□□□□□ -0.57
ATG4B-206ENST00000405546 U3KQK5 164 aa11.52□□□□□ -0.57
ATG4B-206ENST00000405546 TRBV6-1A0A0K0K1D8 114 aa11.52□□□□□ -0.57
ATG4B-206ENST00000405546 PRSS29PA6NIE9 313 aa11.52□□□□□ -0.57
ATG4B-206ENST00000405546 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
ATG4B-206ENST00000405546 FOXI1Q12951 378 aa11.52□□□□□ -0.57
ATG4B-206ENST00000405546 CCDC140Q96MF4 163 aa11.52□□□□□ -0.57
ATG4B-206ENST00000405546 TM2D2Q9BX73 214 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms