RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
SMC1B-202ENST00000404354 PDE6HQ13956 83 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 Q8N8P6 123 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 C8orf31Q8N9H6 132 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 PLEKHB2Q96CS7 222 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 TM2D2Q9BX73 214 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 RAB1BQ9H0U4 201 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 KAAG1Q9UBP8 84 aa7.37□□□□□ -1.23
SMC1B-202ENST00000404354 HRNRQ86YZ3 2850 aaPredicted RBP7.37□□□□□ -1.23
SMC1B-202ENST00000404354 C2CD3Q4AC94 2353 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 F8W1H4 67 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 ATP5LO75964 103 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 ZNF672Q499Z4 452 aaPredicted RBP7.36□□□□□ -1.23
SMC1B-202ENST00000404354 ZMAT4Q9H898 229 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 HOXA3O43365 443 aaPredicted RBP7.36□□□□□ -1.23
SMC1B-202ENST00000404354 SLC25A16P16260 332 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 S100A4P26447 101 aaKnown RBP7.36□□□□□ -1.23
SMC1B-202ENST00000404354 RRN3P1Q2M238 152 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 ANXA2RQ3ZCQ2 193 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 TNFRSF14Q92956 283 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 HIGD1BQ9P298 99 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 RAXQ9Y2V3 346 aa7.36□□□□□ -1.23
SMC1B-202ENST00000404354 IGHV3OR16-10A0A075B7F0 116 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 ZNF815PA8K554 130 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 TMEM78Q5T7P6 136 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 A0A087WX48 190 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 A0A1B0GV72 72 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 PRSS29PA6NIE9 313 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 CD3EP07766 207 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 MT-ATP8P03928 68 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 PRR9Q5T870 116 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 NRACQ8N912 160 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 PRADC1Q9BSG0 188 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 NCOR2Q9Y618 2525 aa7.35□□□□□ -1.23
SMC1B-202ENST00000404354 IGLV2-18A0A075B6J9 118 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 F6UB75 175 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 LY6LH3BQJ8 138 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 SRD5A1P18405 259 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 SRSF1Q07955 248 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMC1B-202ENST00000404354 NFE4Q86UQ8 179 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 MUC6Q6W4X9 2439 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 NACAE9PAV3 2078 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 MORN3Q6PF18 240 aaPredicted RBP7.34□□□□□ -1.23
SMC1B-202ENST00000404354 SPINK8P0C7L1 97 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 KIR2DL4Q99706 377 aa7.34□□□□□ -1.23
SMC1B-202ENST00000404354 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 LGALS1P09382 135 aaKnown RBP7.33□□□□□ -1.24
SMC1B-202ENST00000404354 BUB3O43684 328 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 SCGB1C2P0DMR2 95 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 GATA3P23771 443 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
SMC1B-202ENST00000404354 CRYBA4P53673 196 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 C16orf92Q96LL3 132 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 GEMIN7Q9H840 131 aaKnown RBP7.33□□□□□ -1.24
SMC1B-202ENST00000404354 IGHV7-4-1A0A0J9YVY3 117 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 F8VRH5 84 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 FHL3Q13643 280 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 TMEM219Q86XT9 240 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 RAX2Q96IS3 184 aa7.33□□□□□ -1.24
SMC1B-202ENST00000404354 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 H7C1H1 209 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 GNRH2O43555 120 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 JPT2Q9H910 190 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 PRO0461Q9UI25 63 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 IGHV7-81A0A0B4J1V7 117 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 C2orf66Q6UXQ4 117 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 VPS13CQ709C8 3753 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 CHD8Q9HCK8 2581 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 B9A039 149 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 ATP6V0E1O15342 81 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 FOXI1Q12951 378 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 C8orf86Q6ZUL3 223 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 VMO1Q7Z5L0 202 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 SMIM2Q9BVW6 85 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 SMPXQ9UHP9 88 aa7.32□□□□□ -1.24
SMC1B-202ENST00000404354 DUSP14O95147 198 aaKnown RBP7.31□□□□□ -1.24
SMC1B-202ENST00000404354 RPL39P62891 51 aaKnown RBP7.31□□□□□ -1.24
SMC1B-202ENST00000404354 BEX4Q9NWD9 120 aaPredicted RBP7.31□□□□□ -1.24
SMC1B-202ENST00000404354 PHLDA3Q9Y5J5 127 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 F5H697 171 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 RNASE4P34096 147 aaKnown RBP7.31□□□□□ -1.24
SMC1B-202ENST00000404354 TMEM170BQ5T4T1 132 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 CSMD2Q7Z408 3487 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 TRAV8-2A0A0B4J237 113 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 PRTN3P24158 256 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 PLNP26678 52 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 XGP55808 180 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 SUMO2P61956 95 aaKnown RBP7.31□□□□□ -1.24
SMC1B-202ENST00000404354 Q6ZS46 218 aa7.31□□□□□ -1.24
SMC1B-202ENST00000404354 A0A087WWL8 130 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 IGHV3-11P01762 117 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 CDSNQ15517 529 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 IGFL3Q6UXB1 125 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 CRYBG3Q68DQ2 2970 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 TSPAN13O95857 204 aa7.3□□□□□ -1.24
SMC1B-202ENST00000404354 IGKV3-20P01619 116 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms