RNA–Protein interactions for RNA: ENST00000400217.6

CSNK2A1-203, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2 BASIC

Gene CSNK2A1, Length 1,451 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-203ENST00000400217 CAMPP49913 170 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST1H2BDP58876 126 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST1H2BCP62807 126 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 RIGQ13278 110 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST2H2BEQ16778 126 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 SPINK13Q1W4C9 94 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST1H2BHQ93079 126 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST1H2BNQ99877 126 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 HIST1H2BMQ99879 126 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 NAGKQ9UJ70 344 aa12.62□□□□□ -0.39
CSNK2A1-203ENST00000400217 TRAV12-3A0A0B4J271 114 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 ZNF324O75467 553 aaPredicted RBP12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 CTRLP40313 264 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 ANXA2RQ3ZCQ2 193 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 C9orf66Q5T8R8 295 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 GFI1BQ5VTD9 330 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 CLUHP3Q96NS8 147 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
CSNK2A1-203ENST00000400217 TRAV12-2A0A075B6T6 113 aa12.6□□□□□ -0.39
CSNK2A1-203ENST00000400217 A0A1B0GW15 77 aa12.6□□□□□ -0.39
CSNK2A1-203ENST00000400217 F2Z2F3 143 aa12.6□□□□□ -0.39
CSNK2A1-203ENST00000400217 SPATA3Q8NHX4 192 aa12.6□□□□□ -0.39
CSNK2A1-203ENST00000400217 RBMY1BA6NDE4 496 aaKnown RBP12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 RBMY1EA6NEQ0 496 aaKnown RBP12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 S100A8P05109 93 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 S100A6P06703 90 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 RBMY1DP0C7P1 496 aaKnown RBP12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 MUC21Q5SSG8 566 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 STHQ8IWL8 128 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 ATRQ13535 2644 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 APCSP02743 223 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 CD7P09564 240 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 FXYD7P58549 80 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 FAM159AQ6UWV7 190 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 C3orf56Q8N813 242 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
CSNK2A1-203ENST00000400217 KCNS1Q96KK3 526 aa12.58□□□□□ -0.4
CSNK2A1-203ENST00000400217 SSBP4Q9BWG4 385 aaPredicted RBP12.58□□□□□ -0.4
CSNK2A1-203ENST00000400217 TENM1Q9UKZ4 2725 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 MUC21A0A0G2JKD1 596 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 MUC21A0A140T8X8 626 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 OR5AL1P0C617 328 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 ASIPP42127 132 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 NDUFA6P56556 154 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 SSTP61278 116 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 SLAQ13239 276 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 DNLZQ5SXM8 178 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 TMEM158Q8WZ71 300 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 CNFNQ9BYD5 112 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 C19orf73Q9NVV2 129 aa12.57□□□□□ -0.4
CSNK2A1-203ENST00000400217 LOC105371267A0A1B0GV96 52 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 CRXO43186 299 aaPredicted RBP12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 GNRH2O43555 120 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 SNAI2O43623 268 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 NTF3P20783 257 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 TDRG1Q3Y452 100 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 SHISA2Q6UWI4 295 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 TRPT1Q86TN4 253 aaKnown RBP12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 GATD1Q8NB37 220 aa12.56□□□□□ -0.4
CSNK2A1-203ENST00000400217 H3BVH4 76 aa12.55□□□□□ -0.4
CSNK2A1-203ENST00000400217 S100A4P26447 101 aaKnown RBP12.55□□□□□ -0.4
CSNK2A1-203ENST00000400217 SNRPEP62304 92 aaKnown RBP12.55□□□□□ -0.4
CSNK2A1-203ENST00000400217 TWIST1Q15672 202 aa12.55□□□□□ -0.4
CSNK2A1-203ENST00000400217 KIAA1644Q3SXP7 199 aa12.55□□□□□ -0.4
CSNK2A1-203ENST00000400217 IGHV1OR15-1A0A075B7D0 117 aa12.54□□□□□ -0.4
CSNK2A1-203ENST00000400217 C5orf52A6NGY3 159 aa12.54□□□□□ -0.4
CSNK2A1-203ENST00000400217 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
CSNK2A1-203ENST00000400217 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
CSNK2A1-203ENST00000400217 MAST4O15021 2626 aa12.54□□□□□ -0.4
CSNK2A1-203ENST00000400217 AMBPP02760 352 aa12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 CACNG7P62955 275 aa12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 IGHV4-4A0A075B6R2 117 aa12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 RNASE3P12724 160 aaKnown RBP12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 NUTF2P61970 127 aaKnown RBP12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 OR10AG1Q8NH19 301 aa12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 WFDC10AQ9H1F0 79 aa12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 MSRB1Q9NZV6 116 aa12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
CSNK2A1-203ENST00000400217 RBMY1A1P0DJD3 496 aaKnown RBP12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 RBMY1CP0DJD4 496 aa12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 IGLL1P15814 213 aa12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 RBMY1FQ15415 496 aaKnown RBP12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 PRR31Q5SQ13 230 aa12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 SPANXN1Q5VSR9 72 aa12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 C20orf144Q9BQM9 153 aa12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 SCRT2Q9NQ03 307 aa12.52□□□□□ -0.41
CSNK2A1-203ENST00000400217 FBN1P35555 2871 aaKnown RBP12.51□□□□□ -0.41
CSNK2A1-203ENST00000400217 GTSCR1Q86UQ5 136 aa12.51□□□□□ -0.41
CSNK2A1-203ENST00000400217 Q8N1Y9 231 aa12.51□□□□□ -0.41
CSNK2A1-203ENST00000400217 TP53TG3Q9ULZ0 132 aa12.51□□□□□ -0.41
CSNK2A1-203ENST00000400217 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
CSNK2A1-203ENST00000400217 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
CSNK2A1-203ENST00000400217 IGHV3-16A0A0C4DH30 117 aa12.5□□□□□ -0.41
CSNK2A1-203ENST00000400217 INSP01308 110 aa12.5□□□□□ -0.41
CSNK2A1-203ENST00000400217 HOXA5P20719 270 aa12.5□□□□□ -0.41
CSNK2A1-203ENST00000400217 SRIP30626 198 aa12.5□□□□□ -0.41
CSNK2A1-203ENST00000400217 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms