RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 MAPKAPK5-AS1Q8N8E1 139 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 MED12Q93074 2177 aa7.81□□□□□ -1.16
PTPRM-203ENST00000400060 TRBV7-1A0A0A6YYK4 115 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV1-18A0A0C4DH31 117 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV3-33P01772 117 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 FAM201AQ5SY85 155 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 DAND5Q8N907 189 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 IGKV1OR2-108A0A075B7D4 117 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 TRAV26-2A0A0B4J265 109 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 A0A0J9YY99 117 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 UBE2D1P51668 147 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 ZNF134P52741 427 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 TMEM200BQ69YZ2 307 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
PTPRM-203ENST00000400060 PF4P02776 101 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 PSMB8P28062 276 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 TMEM131Q92545 1883 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 ZNF876PQ49A33 203 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
PTPRM-203ENST00000400060 PRIMA1Q86XR5 153 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 PPDPFQ9H3Y8 114 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 PINLYPA6NC86 204 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 C17orf100A8MU93 164 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 M0R1W7 72 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 IGKV3-15P01624 115 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 ZNF491Q8N8L2 437 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 A0A0J9YXY3 114 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV3-30P01768 117 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV3-30-5P0DP03 117 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 PRO0628Q9UI54 55 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 SERP1Q9Y6X1 66 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 LINC00322Q6ZN03 302 aaPredicted RBP7.79□□□□□ -1.16
PTPRM-203ENST00000400060 COL4A6Q14031 1691 aa7.79□□□□□ -1.16
PTPRM-203ENST00000400060 CCL21O00585 134 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 BRK1Q8WUW1 75 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 ORMDL1Q9P0S3 153 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 PRO0461Q9UI25 63 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 WI2-2373I1.2A0A1W2PRP0 233 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 IGHV1-46P01743 117 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 MALP21145 153 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 HHLA3Q9XRX5 114 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 GVINP1Q7Z2Y8 2422 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 CEP250Q9BV73 2442 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 SMIM26A0A096LP01 95 aa7.78□□□□□ -1.16
PTPRM-203ENST00000400060 F6UB75 175 aa7.77□□□□□ -1.16
PTPRM-203ENST00000400060 COX7A2LO14548 114 aa7.77□□□□□ -1.16
PTPRM-203ENST00000400060 CLEC19AQ6UXS0 136 aa7.77□□□□□ -1.16
PTPRM-203ENST00000400060 NFE4Q86UQ8 179 aa7.77□□□□□ -1.16
PTPRM-203ENST00000400060 C9orf106Q8NAJ2 232 aa7.77□□□□□ -1.16
PTPRM-203ENST00000400060 KLHL30-AS1Q8NEE0 82 aa7.77□□□□□ -1.16
PTPRM-203ENST00000400060 TRAV41A0A0B4J266 112 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 B9A039 149 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 IGHV3-23P01764 117 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 MIAQ16674 131 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 CFHR4Q92496 578 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 A0A0J9YX75 114 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 BRWD1-AS2P59051 145 aa7.77□□□□□ -1.17
PTPRM-203ENST00000400060 BUB1B-PAK6H3BSN5 160 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 LINC00158P58513 81 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 KHDC1LQ5JSQ8 128 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 APC2O95996 2303 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 Q6JHZ5 121 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 S4R3C0 116 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 CNOT1A5YKK6 2376 aaKnown RBP7.76□□□□□ -1.17
PTPRM-203ENST00000400060 WIPF1O43516 503 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 GATA1P15976 413 aaPredicted RBP7.76□□□□□ -1.17
PTPRM-203ENST00000400060 PAX8Q06710 450 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 SBSPONQ8IVN8 264 aa7.76□□□□□ -1.17
PTPRM-203ENST00000400060 GATA3P23771 443 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 PRORYQ9H606 182 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 IGKV1D-37A0A075B6S9 117 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 IGHV3-66A0A0C4DH42 116 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 LST1O00453 97 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 ZNRF2Q8NHG8 242 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 PROK2Q9HC23 129 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 SPRR3Q9UBC9 169 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 MRPL55Q7Z7F7 128 aaKnown RBP7.75□□□□□ -1.17
PTPRM-203ENST00000400060 C11orf53Q8IXP5 236 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 TMEM105Q8N8V8 129 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 TMEM263Q8WUH6 116 aaKnown RBP7.75□□□□□ -1.17
PTPRM-203ENST00000400060 NOTCH4Q99466 2003 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 LINC01546A6NGU7 62 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 FAM223BA6NKX1 122 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 DKK1O94907 266 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 FAM27E3Q08E93 113 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 Q0VFX4 171 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 FAM223AQ8IWN6 122 aa7.75□□□□□ -1.17
PTPRM-203ENST00000400060 CRYGAP11844 174 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 DIAPH2-AS1Q14236 149 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 MINOS1Q5TGZ0 78 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 MINOS1-NBL1R4GNA1 71 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 THADAQ6YHU6 1953 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 ATG2AQ2TAZ0 1938 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 I3L2K1 104 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 TIMM17BO60830 172 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 TRGV3P03979 118 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 UBE2E1P51965 193 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 SPRY4Q9C004 299 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms