RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 AGRNO00468 2067 aa12.35□□□□□ -0.43
CHMP1A-201ENST00000397901 ORM1P02763 201 aa12.35□□□□□ -0.43
CHMP1A-201ENST00000397901 ZNF688P0C7X2 276 aa12.35□□□□□ -0.43
CHMP1A-201ENST00000397901 SVEP1Q4LDE5 3571 aa12.35□□□□□ -0.43
CHMP1A-201ENST00000397901 GRNP28799 593 aaKnown RBP12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 PSMB2P49721 201 aa12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 SMAD5-AS1Q9Y6J3 95 aa12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 FAM90A27PA6NNH2 459 aa12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 NHLRC4P0CG21 123 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 LY6G5BQ8NDX9 201 aa12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 CITED1Q99966 193 aa12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 MRPL35Q9NZE8 188 aaKnown RBP12.34□□□□□ -0.43
CHMP1A-201ENST00000397901 IGLC6P0CF74 106 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 OR11H6Q8NGC7 330 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 IGHG4P01861 327 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 KLRB1Q12918 225 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 ERCC8Q13216 396 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 SPTA1P02549 2419 aa12.33□□□□□ -0.44
CHMP1A-201ENST00000397901 SRD5A1P18405 259 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 LYRM7Q5U5X0 104 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 PTH2Q96A98 100 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 RNF185Q96GF1 192 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 RAX2Q96IS3 184 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE12JA6NER3 117 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 CCL21O00585 134 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE7O76087 117 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE12FP0CL80 117 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE12GP0CL81 117 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE12IP0CL82 117 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE4Q13068 117 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 COX8CQ7Z4L0 72 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 DYNAPQ8N1N2 210 aa12.32□□□□□ -0.44
CHMP1A-201ENST00000397901 MYMXA0A1B0GTQ4 84 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 CTSGP08311 255 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 GATA1P15976 413 aaPredicted RBP12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 CACNA1BQ00975 2339 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 PRAC2D3DTV9 90 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 RHODO00212 210 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 PLNP26678 52 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 CDSNQ15517 529 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 SMIM20Q8N5G0 67 aa12.31□□□□□ -0.44
CHMP1A-201ENST00000397901 MED13LQ71F56 2210 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 A0A087WX48 190 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 LOC107984156A0A0G2JMH3 177 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 ADORA2A-AS1P86434 159 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 ARL17AQ8IVW1 177 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 UBE2D3P61077 147 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 UBE2D2P62837 147 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 SBSPONQ8IVN8 264 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 RNF182Q8N6D2 247 aa12.3□□□□□ -0.44
CHMP1A-201ENST00000397901 SPTBN4Q9H254 2564 aa12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 NBASA2RRP1 2371 aa12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 IGHV3-66A0A0C4DH42 116 aa12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 LINC01549A6NIU2 74 aa12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 NDUFV3P56181 108 aaKnown RBP12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 Q8N8P6 123 aa12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 A8MWV9 139 aa12.29□□□□□ -0.44
CHMP1A-201ENST00000397901 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 ZFP2Q6ZN57 461 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 IGHV3OR16-13A0A075B7E8 117 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 IGHV3-74A0A0B4J1X5 117 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 PRTN3P24158 256 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE2BQ13066 116 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE2EQ4V326 116 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 IL17RELQ6ZVW7 336 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 GAGE2DQ9UEU5 116 aa12.28□□□□□ -0.44
CHMP1A-201ENST00000397901 ATRXP46100 2492 aa12.27□□□□□ -0.44
CHMP1A-201ENST00000397901 VMO1Q7Z5L0 202 aa12.27□□□□□ -0.45
CHMP1A-201ENST00000397901 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.45
CHMP1A-201ENST00000397901 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.45
CHMP1A-201ENST00000397901 UBE2D1P51668 147 aa12.27□□□□□ -0.45
CHMP1A-201ENST00000397901 TIMD4Q96H15 378 aa12.27□□□□□ -0.45
CHMP1A-201ENST00000397901 TNFRSF18Q9Y5U5 241 aa12.27□□□□□ -0.45
CHMP1A-201ENST00000397901 PSMG3-AS1Q96PY0 264 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 HRNRQ86YZ3 2850 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 ASH1LQ9NR48 2969 aaKnown RBP12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 IGHV7-81A0A0B4J1V7 117 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 LINC01548A6NM66 108 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 CCDC179H3BU77 68 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 M0R1W7 72 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 SCGB2A1O75556 95 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 ASIPP42127 132 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 C1orf122Q6ZSJ8 110 aa12.26□□□□□ -0.45
CHMP1A-201ENST00000397901 IGLV2-18A0A075B6J9 118 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 SNCGO76070 127 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 LGALS1P09382 135 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 ECSCRQ19T08 205 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 ANKRD29Q8N6D5 301 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 KIR2DL4Q99706 377 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 CNFNQ9BYD5 112 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 IGHV3-49A0A0A0MS15 119 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 TRGV3P03979 118 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 CLEC3BP05452 202 aa12.25□□□□□ -0.45
CHMP1A-201ENST00000397901 IFITM1P13164 125 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms